Pseudochrobactrum algeriensis: KHQ08_09825
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Entry
KHQ08_09825 CDS
T07380
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pscq
Pseudochrobactrum algeriensis
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pscq03032
]
KHQ08_09825
03036 Chromosome and associated proteins [BR:
pscq03036
]
KHQ08_09825
03400 DNA repair and recombination proteins [BR:
pscq03400
]
KHQ08_09825
DNA replication proteins [BR:
pscq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KHQ08_09825
Chromosome and associated proteins [BR:
pscq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KHQ08_09825
DNA repair and recombination proteins [BR:
pscq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KHQ08_09825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QVQ38246
LinkDB
All DBs
Position
complement(1709403..1709678)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKNELVAAVAEKSGLTKTDAASAVDAVLESVTGALKDGGEVRLPGFGIFSVSHRAASTG
RNPSTGKEVEIAARNVPKFSAGKGLKDAVNS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaatgaactggttgctgccgttgcagaaaaatcaggtctcaccaagaccgat
gctgcttcagccgttgacgctgtgcttgaatccgtcaccggtgcattgaaggacggcggc
gaagttcgtctgccaggttttggtattttctccgtctcccatcgcgcagcttccacaggc
cgtaatccttcgaccggcaaggaagttgaaattgctgcgcgcaacgtaccaaaattctcg
gctggtaaaggcctgaaagacgctgttaacagctaa
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