KEGG   Pseudochrobactrum algeriensis: KHQ08_10800
Entry
KHQ08_10800       CDS       T07380                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
pscq  Pseudochrobactrum algeriensis
Pathway
pscq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pscq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    KHQ08_10800 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pscq03400]
    KHQ08_10800 (uvrA)
DNA repair and recombination proteins [BR:pscq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KHQ08_10800 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      KHQ08_10800 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_25 AAA_29 DnaJ_CXXCXGXG nSTAND1 AAA_16 RsgA_GTPase AAA_21 ATPase AAA_33 BCA_ABC_TP_C Exo84_C AAA_23
Other DBs
NCBI-ProteinID: QVQ35713
LinkDB
Position
1928322..1931243
AA seq 973 aa
MSDQKFISIRGAREHNLKNIDIDLPRDKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYLRLLYARVGV
PYSPATGLPIESQTVSQMVDRVMAFEEGTRLYIMAPIVRGRKGEYRKELAELQKKGFQRV
KIDGVFYEIADAPALDKKYKHDIDVVVDRVVVRPDLASRLADSLETCLQLAEGLAIAEFA
DKPLPPEETAADSANKSKNDTHERVLFSEKFACPVSGFTIAEIEPRLFSFNNPFGACPTC
DGLGSQQAIDPNLIVPDETLRMKDGAIAPWAKSSSPYYNQTLEALGKAYGFKLTDKWQDL
SEDAQKAVLHGTKGKEITFVYKDGSRSYETTKTFEGVIPNLQRRWKETDSNWSREEIERY
MSATPCPSCAGYRLKPEALAVKVGMMHIGQLTEMSIRNADQWFSTIDQQFNDKQNEIAAR
ILKEIRERLRFLNDVGLDYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG
LHQRDNARLLDTLRHLRDLGNTVIVVEHDEDAILTADYVVDIGPAAGVHGGQIIAKGTPS
EVINNPNSITGKYLSGAMQVMVPAERRKITKSKRIKVVGARANNLKNVTGEIPLGTFTAV
TGVSGGGKSTFLIETLYKAASRKIMGSREHPAEHDRIEGLELLDKVIDIDQSPIGRTPRS
NPATYTGAFTPIRDWFAGLPEAKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV
YVTCDVCNGKRYNRETLEVLFKGKSIADVLDMTVEEGVEFFAAVPSIRDKMETLNRVGLG
YIKIGQQATTLSGGEAQRVKLAKELSRRATGKTLYILDEPTTGLHFHDVAKLLEVLHELV
DQGNTVAVIEHNLEVIKTADWVLDLGPEGGDGGGEIVAVGRPEDIVAEPRSYTGHFLKEL
LERRPDGKTLAAE
NT seq 2922 nt   +upstreamnt  +downstreamnt
atgagcgatcaaaaatttatttccattcgcggcgcccgcgaacataatctgaaaaatatt
gatattgatctgccgcgcgacaagctgattgtcatgaccggtctgtccggttccggtaaa
tcatcgctcgctttcgacacgatttatgcggaaggtcagcgccgttatgtcgagagtctt
tcagcctatgcgcgccagtttctggaaatgatgcaaaagccggatgttgaccagattgac
ggtctgtcaccggctatttccattgaacagaaaaccaccagccgcaacccgcgctcaacg
gtcggtactgtcaccgagatttacgattatctgcgcctgctctatgcgcgcgttggcgta
ccttactcccctgccacaggcctgccgattgaaagccagacagtcagccagatggttgac
cgtgtgatggcttttgaagaaggcacccgcctctatatcatggcgccgattgtacgcggc
cgtaagggggaataccgcaaagagctcgctgagctgcagaaaaaaggcttccagcgcgtc
aaaattgacggtgttttctatgaaatcgccgatgcaccggcactggataaaaaatacaag
cacgacattgatgtggtggttgaccgcgttgtggtgcgtcctgatctggcttcccgccta
gccgacagtctggaaacctgtctgcaactggctgaaggtctggcgattgcagaatttgcg
gataagccgctgccaccagaagaaaccgcagcagacagcgccaataaatccaaaaacgac
acccatgagcgcgtgctgttctccgagaagtttgcctgccctgtctccggttttaccatt
gccgagattgagccgcgcctgttctccttcaacaatccgtttggtgcctgcccgacctgt
gacggtcttggttcacagcaggccattgatccgaacctgattgtgccggatgaaaccctg
cgcatgaaagacggtgcaatcgcaccttgggcaaaatcctcttcgccttattacaatcag
actttggaagcactgggtaaagcctatggtttcaagctgacagataagtggcaggatttg
agcgaagatgcccaaaaggctgtgcttcatggtaccaaaggtaaagaaattacctttgtt
tataaggacggctcacgctcttacgaaaccaccaagacatttgaaggtgttattcctaat
ctgcagcgccgctggaaggaaaccgattccaactggtcgcgtgaagagattgaacgctat
atgtctgccacaccttgcccttcctgtgcaggctatcgcctgaaaccggaagcactggcg
gttaaagtcggcatgatgcatatcggccagctgacagaaatgtcgatccgcaatgcagac
cagtggttcagcacaatcgaccagcagttcaatgacaagcagaacgaaattgccgcacgt
attctgaaagaaatccgcgagcgtctgcgcttcctcaatgatgtagggctggattatctg
tcactgtcgcgtaattccggcacgctttccggcggtgaaagccagcgtatccgtctggct
tcgcagatcggctccggcctgaccggcgttctctatgtgctggatgaaccatccattggt
ttgcatcagcgcgacaatgcacgtctgctcgacacgctgcgtcatctgcgtgatctcggc
aataccgtaattgtggttgagcatgatgaggatgccatcctcacagccgattatgtcgtt
gatattggtccggcagccggtgttcatggtggtcagattattgctaagggtacaccgtcc
gaagtgataaacaatccaaattctatcaccggcaaatatctgtccggtgctatgcaggtt
atggttccggcagaacgccgtaaaatcactaaatccaaacgcattaaagttgttggtgcc
cgcgccaataatctgaagaacgtaaccggtgaaattccgctcggtacctttaccgcagta
accggcgtatccggtggcggtaagtccaccttcctgatcgaaaccctgtataaagctgct
tcacgtaaaattatgggctcccgcgagcatccggccgaacacgaccggattgaaggtctg
gaactgctggataaggtgatcgatatcgatcagtcaccaatcggccgtacgccgcgttcc
aatccggcaacttataccggtgccttcacaccaatccgcgactggtttgccggtctgccg
gaagcaaaagcacgcggctatcagcctggccgcttctcattcaacgtcaaaggcggacgc
tgtgaagcctgtcagggtgacggtgtcatcaagatcgaaatgcacttcctgcctgatgtt
tacgtgacttgtgatgtttgtaacggcaaacgctacaaccgtgaaacactggaagttctt
tttaaaggcaagagcatcgccgatgttcttgatatgacggttgaagaaggtgtggaattc
ttcgctgcggtgccaagcatccgcgacaagatggaaacgctgaaccgcgttggccttggc
tatatcaaaatcggccagcaggcgaccacgctctccggcggtgaagcccagcgtgttaaa
ctcgccaaagaactatctcgccgtgcaaccggcaagacgctgtatattcttgatgaacca
accaccggcctgcatttccatgacgttgccaaactgctggaagtgctgcacgagcttgtt
gatcagggcaatacggttgctgttatcgagcataatctcgaagtcatcaaaaccgctgac
tgggtattggatctgggccctgaaggcggtgacggcggtggtgagattgtggccgtcggt
cgtccggaagatatcgtcgccgaaccgcgttcttataccggccacttcctgaaggaactg
ctggaacgtcgccctgacggcaaaacactcgcagctgaataa

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