Pseudochrobactrum algeriensis: KHQ08_11765
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Entry
KHQ08_11765 CDS
T07380
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pscq
Pseudochrobactrum algeriensis
Pathway
pscq03420
Nucleotide excision repair
pscq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KHQ08_11765
03430 Mismatch repair
KHQ08_11765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pscq03400
]
KHQ08_11765
Enzymes [BR:
pscq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KHQ08_11765
DNA repair and recombination proteins [BR:
pscq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KHQ08_11765
MMR (mismatch excision repair)
Other MMR factors
KHQ08_11765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
DUF3553
AAA_11
ADH_N_2
DUF4420
DEAD
Motif
Other DBs
NCBI-ProteinID:
QVQ35878
LinkDB
All DBs
Position
2128440..2131052
Genome browser
AA seq
870 aa
AA seq
DB search
MSDFPDDIPFFGEPDVPATPKPQSGPKAGIAARAMQARNQQRGEPDYLQGLNPEQRQAVE
TTEGPVLVLAGAGTGKTRVLTTRIAHIIQQGLAFPSQILAVTFTNKAAREMKERIGHLLG
GAVEGMPWLGTFHSIGVKMLRRHAELAGLRSDFTILDTDDVIRLLKQLIQAEGLDDKRWT
PRSFSMMIDGWKNKGYGPSEISEGDARAFANGKGRELYYAYQERLKTLNACDFGDLLLHP
IRIFRKHPDILREYHSKFRYILVDEYQDTNTAQYMWLRLLAQRPKFTTPQDNTPNATDWS
SADFSAAPAEHSRDSGDSVSTKKINTDRPAQQVNLCCVGDDDQSIYGWRGAEVDNILRFD
KDFPGATIIRLERNYRSTPHILGAASYLIAHNEGRFGKTLLPQAASEDDQKVHVHAAWDS
EEEARAVGEEIEQAQRRGHLLNDMAILVRASFQMREFEDRFVTLGLNYRVIGGPRFYERQ
EIRDAMAYFRVVAQPADDLAFERIVNTPKRGLGEASLRLVHDYARAKNMPMLLAAEDLIA
TEELKPKARSALREVVENFRRWQGLLDNKSHTELAEIILDESGYTAMWQNDRSAEAPGRL
ENLKELIRSMEEYESLRGFLEHVALVMDTEQNEGMDAVSIMTLHSAKGLEFQTVFLPGWE
EGLFPHQRALDEGGRSGLEEERRLAYVGLTRAKKNLHIWFVSNRRIHGMWQTTIPSRFLE
ELPEEHVDIAESDSSYGGGYGQSRFDAVGRGDPFANSYSTPGWQRAQQNRSDATRNNWGS
RSGANVERIGYGETDSGFGAGRGSVKGKVIDGELVAKSVSSTPSDFKVGDRVFHMKFGNG
NVVSIDGNKLTIDFDHAGQKRVIDSFVKRV
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttccagacgatattcccttcttcggggagccggatgtaccggctacacct
aaaccgcaatctggtccaaaagccgggattgccgcgcgggctatgcaggcgcgcaaccag
caacgcggtgaaccagattatctgcaagggctaaaccctgagcagcggcaggcggtcgaa
acgactgaagggccggttctggttctggccggtgcgggcaccggcaaaacccgtgttctg
accacgcgtattgcgcatattattcagcagggtctggcattcccaagtcagatcctcgca
gtgacctttaccaataaagccgcacgcgagatgaaagagcgtatcggccatctgcttggc
ggcgcggttgaaggtatgccatggcttggcacattccactccatcggagtgaagatgttg
cgccgccatgcggaactggccggactgcgctctgattttactattcttgatacggacgat
gtgatccgcctgctcaaacagcttattcaggctgaagggctggatgacaaacgctggacg
ccgcgctctttctcgatgatgatcgacggctggaagaacaaaggttacggcccgtctgaa
atttcagagggtgatgcccgtgcttttgccaatggcaaagggcgtgaactttattatgcc
tatcaggaacggctgaaaacgctgaatgcctgtgattttggtgatctgctgctgcatccg
atccggattttccgcaaacatccggacatcctgcgcgaatatcactcgaaattccgctat
attctggtggatgagtatcaagataccaacaccgcacaatatatgtggctgagactgctg
gcgcaaaggcctaaatttacaacacctcaagataacactcccaacgcgaccgactggtcg
tcggctgacttttcagccgcccctgcggagcacagccgcgatagcggcgacagcgtgagc
acaaagaaaatcaacacagacagacctgcgcagcaggtcaatctgtgttgtgttggcgat
gatgatcagtcgatctatggctggcgcggggcggaagtggataatattctgcgctttgac
aaggattttccgggcgcgactatcattcgtcttgagcgcaattaccgttccacaccgcat
attttgggtgcagcatcctatctgattgcccataatgaagggcgctttggcaaaacactg
ctgccgcaggctgcgagtgaagatgaccagaaagtgcatgtgcatgcggcttgggactca
gaggaagaagcccgtgcggtcggtgaagagatcgaacaggctcagcgtcgcggccatctg
cttaatgatatggctattctggtgcgtgcctcgttccagatgcgtgagtttgaagaccgt
ttcgtaacactcggcctgaattaccgcgttatcggcggcccgcgcttctatgaacgtcag
gaaatccgcgatgcgatggcttatttccgcgttgttgcccagcctgccgatgatctggcc
tttgagcgcatcgtcaacacaccgaagcgcggtcttggtgaggcaagcctacgactagta
catgattatgcacgtgcaaaaaatatgcctatgctgctcgcggcagaagacctgattgca
acagaagagctgaagcccaaggcccgttccgcactgcgcgaagtggttgagaatttccgg
cgctggcaggggctactcgacaataaatcccatacggaactggcagaaatcattctcgat
gaatccggctatacggcgatgtggcagaatgaccgctccgccgaagcaccgggacgtctg
gaaaacctcaaagaactcatccgctccatggaagaatatgaaagcctgcgcggctttctc
gaacatgtggcgctggtgatggatacggaacagaatgaaggcatggatgctgtcagcatc
atgacccttcactcggccaaagggctggaatttcaaactgtgttcttaccgggctgggaa
gaaggcctgttcccgcatcagcgtgcgctggatgaaggcggccgttcagggttggaagaa
gaacgccgcctcgcctatgtcggcctgacccgcgccaagaaaaacctgcatatctggttt
gtatccaaccgccgtattcacggcatgtggcagaccacgatcccgtcccgctttctggaa
gaattgccggaagagcatgtggatattgcggagtccgacagttcctatggcggcggttat
ggtcaatcacgctttgatgctgtgggacgtggtgatccgtttgccaattcctattccaca
ccgggctggcagcgggcgcagcaaaaccgctccgatgcgacacgcaacaattggggttcc
cgctccggtgccaatgtcgagcgcatcggttatggcgaaacagattccggtttcggtgcc
ggtcgcggctcggtcaaaggcaaggtcattgacggcgagctggtggcaaaatccgtttcc
tcaacaccatcagactttaaggtcggcgaccgtgttttccatatgaaattcggcaacggc
aatgtcgtctcaattgacggcaacaaactgaccatcgactttgaccatgccggacaaaaa
cgcgtcatcgacagttttgtgaaacgggtataa
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