Pseudochrobactrum algeriensis: KHQ08_12700
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Entry
KHQ08_12700 CDS
T07380
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pscq
Pseudochrobactrum algeriensis
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
KHQ08_12700
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
HHH_6
OB_RRP5_4th
OB_cyt-4
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QVQ36037
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Position
2336588..2338897
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AA seq
769 aa
AA seq
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MTDITRRIAAIIAGEINAKQEQAVAAIGLLDEGSTVPFIARYRKEVTGGLDDTQLRNLSE
RLTYLRELEARRSSILDSIRTQEKLTPELELKIANVSTKAELEDIYLPYKPKRRTRAEIA
RERGLGALAQAILDNRAAVPAELAAAYITPDVADVKAALEGARDIIAEGITENADLLGRL
RSYMKDNAVLQSRVVAGKETEGAKFSDYFAHSEQWNKVAGHRALAMLRGRNEDFLTLDIV
VDQQDTSPVKPVERMIAHSYQVGGTLAGDKWLMEVIGWTWRVKLSLSLSLDLMRDLRERA
EEEAINVFARNLKDLLLAAPAGSRATMGLDPGIRTGVKVAIVDGTGKLLDTATVYPFQPR
NDLRGAQAEIASLIRKHKVELIAIGNGTASRETERMVADLLGDMPAPKPLKVIVSEAGAS
VYSASETAAAEFPQLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQARLAH
MLNAVVEDAVNAVGVDLNTASASLLARVSGLGTSLAEAVVAHRNENGPFKKRKDLLKVAR
LGNRTFEQAAGFLRIPNGTEPLDASSVHPEAYGVAAKIVAACGRDVRSLMGDAGALRALD
PRLFVDERFGLPTVKDILSELEKPGRDPRPEFKTATFADGIDDIKDLKPGMLLEGTVTNV
AAFGAFVDIGVHQDGLVHVSQLADKFVKDPHEVVKAGDVVKVRVTEVDVPRKRIGLTMRK
DGGGEAAPKPMGERGQRPAQKHFTAKPQEKPAEAQGGFGAALLEAMKRK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgacagacattaccagacggattgccgccatcattgccggtgagatcaatgccaaacag
gaacaggcggttgccgctatcggcttgcttgatgaaggctcgaccgtgccgttcatcgcc
cgctaccgtaaagaagtgaccggcggtcttgatgacacgcaattgcgcaatctgtccgag
cgtctgacttacttacgtgaactggaagcccgccgcagttccattctggactccatccgt
acacaggaaaaactcacaccggagctggaactgaaaatcgcgaatgtcagcaccaaagct
gaacttgaagatatctacctgccatataaaccaaagcgccgtacccgtgccgagatcgct
cgtgagcgtggccttggcgcattggcgcaggctatcctcgataatcgcgctgcggtgcct
gccgaactggcagcagcctatatcacgccggatgtggccgatgtgaaagccgcccttgaa
ggtgcgcgcgatattatcgccgaaggcattaccgaaaacgctgatctgcttggccgcctg
cgctcttatatgaaggacaatgcggttctgcagtctcgtgtcgttgccggcaaagaaact
gaaggcgcaaaattctccgattattttgcccatagcgaacagtggaacaaggttgccggt
caccgtgcgcttgccatgttgcgcggccgtaatgaagatttcctgacattggatattgtt
gttgaccagcaggatacatcgccggtcaaaccggttgagcggatgatcgcccatagctat
caggtcggcggcacgctggccggtgataaatggctgatggaagtgatcggctggacatgg
cgcgttaagctctcactgtccctctccctcgatctgatgcgcgatctgcgcgaacgcgcg
gaagaagaagcgatcaatgttttcgcccgcaatctgaaagacctgctgctggcagcacct
gccggttcccgtgctaccatgggtcttgatccgggtatccgcaccggcgtgaaagtggcg
atcgttgacggtaccggcaagctgctggacactgcaacggtctatccgttccagccgcgc
aatgatctgcgcggtgcacaggctgaaatcgcctcgctgatccgcaagcataaagtagag
ctgatcgctatcggcaacggcaccgccagccgcgagaccgagcgtatggttgctgactta
ttgggcgacatgcctgctccgaaaccgcttaaagtgattgtttcagaagccggtgcatcg
gtttactcagcatcggaaacagcggcagcagaatttccgcagcttgatgtgtcgctgcgc
ggtgcggtttctatcgcccgtcgcctgcaagacccgttggcagaactggtgaaaatcgaa
ccaaaatccatcggtgtcggccagtatcagcacgatgtggatcaggcgcgcctcgcccat
atgctgaatgccgtagtggaagatgcggtgaatgctgtcggtgttgatctcaatacggct
tccgcatcattgcttgcccgcgtttccggccttggcacatcgcttgcagaagccgttgtt
gcgcaccgcaatgaaaacggcccgttcaagaaacgtaaagacctgctcaaagtcgcccgt
ctcggcaaccgcacatttgaacaggcagcgggcttcctgcgtatcccgaacggtaccgag
ccgcttgatgcctcatccgtgcaccctgaagcctatggcgtggccgccaaaattgttgcc
gcttgtggccgcgatgtgcgctcactgatgggcgatgccggtgctttacgtgcgcttgat
ccgaggctctttgttgatgagcgttttggtctgccaacggtgaaagacattttgtcggaa
ctggaaaagccgggtcgcgatccgcgtccggaatttaaaaccgcgacttttgctgatggc
attgatgatattaaggacctcaaacccggcatgttgctggaaggcaccgtaaccaatgtt
gccgcctttggtgcctttgttgatatcggcgtgcatcaggacggcctcgtccatgtgtcc
cagcttgccgataaattcgtcaaggatccgcatgaggtggtgaaggccggtgatgtggtg
aaagtgcgtgtgacagaagtggacgtaccgcgcaaacgtattggcctgaccatgcgtaaa
gacggcggcggtgaagctgcgcccaagcctatgggtgagcgtggacagcgtccggcacag
aaacatttcacagccaagccgcaggagaaacctgctgaagctcagggcggttttggtgca
gcactgctggaagccatgaaacgcaaataa
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