Pseudochrobactrum algeriensis: KHQ08_12845
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Entry
KHQ08_12845 CDS
T07380
Name
(GenBank) bifunctional transcriptional activator/DNA repair protein Ada
KO
K10778
AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:
2.1.1.63
]
Organism
pscq
Pseudochrobactrum algeriensis
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pscq03000
]
KHQ08_12845
03400 DNA repair and recombination proteins [BR:
pscq03400
]
KHQ08_12845
Enzymes [BR:
pscq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.63 methylated-DNA---[protein]-cysteine S-methyltransferase
KHQ08_12845
Transcription factors [BR:
pscq03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KHQ08_12845
DNA repair and recombination proteins [BR:
pscq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
KHQ08_12845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_binding_1
Ada_Zn_binding
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QVQ36066
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Position
2371789..2372853
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AA seq
354 aa
AA seq
DB search
MLFSLPDPKILYQALLDRDQSYDGHVFVGVTSTGIFCRLSCPARKPKFENSRFFDHPAAC
MEAGFRPCQRCRPLDFYRGKEPVVAKLLDCLDARPDHFWCEDDLIAMQLDPSTVRRAFKR
HLGMTFLDMARLRRKARGLESIAAGHSVIDAQLEAGYDSGSGFREAITQLIGDTPAQLKG
RDLLKADWLETPIGSMLAVADQHHLHLLEFFERKGLPNELKKLRLYTKSSISFGRLAPID
QIEAELKLYFTGGFTGFKTPLALYAPAFTRSVWDTLQEIPLGETRSYAELAELTGRPDAI
RAVANANGANQLSIIIPCHRTIGSDGSLTGYGGGLWRKRWLLEHEKRMAARSAA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgctattttctttacctgaccctaaaattctttatcaggcacttcttgatcgtgaccag
tcctatgacggccatgtttttgtcggtgtgaccagcaccggcatcttctgccgcctgtcc
tgtccggcgcgtaaaccgaaattcgagaacagccgcttttttgatcatccggccgcctgt
atggaagcgggcttccggccgtgtcagcgctgccgtccgctggatttttatcgtggcaag
gaaccggttgtcgccaaattgctggattgtctggatgcccgtccggatcatttctggtgc
gaagatgacctcatcgccatgcaacttgatccttccacagtgcgccgtgctttcaaacgc
catctgggtatgacttttctggatatggcacgactacgccgcaaagcacgcgggcttgaa
agcattgccgccggtcattccgtgatcgatgcccagcttgaggccggttatgattccggc
agcggttttcgcgaagccattacgcagctaatcggtgatacgcctgcccaactgaaaggg
cgtgacctgctgaaagccgactggctggaaacaccaatcggctccatgctcgccgttgcc
gaccagcatcatctgcatttgctggagttttttgagcgcaaaggcctgcccaatgagctg
aaaaaactgcgcctctacaccaaatcatccatcagctttggccgtcttgcgccgattgat
cagattgaagcagagctgaagctctatttcaccggtggctttaccggctttaaaacaccc
ttggcgctttatgctccggcctttacccgctcggtctgggatacattgcaggaaattccg
ttgggtgaaacccgttcttatgccgagctggcagagttgaccggacgtcccgatgccata
cgtgccgtggccaatgccaatggtgcaaatcagctgtcgattattatcccgtgtcaccgc
accatcggctcggacggatcactcacgggatatggcggcggtctatggcgcaaacgctgg
ctgcttgagcacgagaaacgtatggctgcccgttccgccgcctga
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