Pseudochrobactrum algeriensis: KHQ08_13245
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Entry
KHQ08_13245 CDS
T07380
Name
(GenBank) lytic murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
pscq
Pseudochrobactrum algeriensis
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pscq01011
]
KHQ08_13245
Enzymes [BR:
pscq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
KHQ08_13245
Peptidoglycan biosynthesis and degradation proteins [BR:
pscq01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
KHQ08_13245
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Paralog
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
PG_binding_2
DUF4153
POTRA_TamA_1
Glucosaminidase
SLT_4
Motif
Other DBs
NCBI-ProteinID:
QVQ36124
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Position
2469518..2470753
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AA seq
411 aa
AA seq
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MLRTHIFKSRFWKTAATTASAAALSLILTTGYASADAQFRKWVSSFRPVALQNGIAPATF
DRAFAGVNAIDPEVLQKARYQPEFTSPVWEYIDNRVNEHSIGTGQAMARKWGKALNAIEK
QYGVDKNVLLAIWSMETGYGEMMQRPDVMRDAIRSLATLAYADQRRAKYARTQLISAMKI
LQTGDIDRGHLSGSWAGAMGHTQFIPTSYQAYAVDFDGNGKRDIWNSVPDALATAANLLR
KNGWEPGRTWGYEVVLPASGKFPSGSLSIAEWRRLGLVRANGRPFPSDAEKATLKVMDGR
SGPAFLMTKNFFVIKRYNNADKYALGVGLLADRVAGYQGLVQDWNRPFTPISMKEREELQ
THLRALGYYDGNIDGKIGSSSRKAIEAFQQRNGLSPDGHPSKEVLSVLRRR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgaacccatattttcaaaagccgcttctggaagaccgcagcaacaactgcctct
gcggctgccttgtcgcttattctgacaaccggctatgcatctgccgatgcacaatttcgc
aaatgggtttccagttttcgccctgtagcccttcagaacgggattgctccggccactttt
gaccgtgcttttgccggtgtgaatgccattgatccggaagtgctgcaaaaagcgcgttat
cagcctgaatttacgtcccctgtctgggaatatatcgacaaccgtgtcaacgaacattct
atcggcaccggtcaggccatggcgcgcaaatggggcaaagccctcaatgcgattgaaaag
caatatggcgtagacaaaaatgtgcttctggctatctggtcgatggaaaccggctatggc
gagatgatgcagcgtccggatgtgatgcgcgatgcgatccgctcactggctacactggcc
tatgccgatcagcgccgcgccaaatatgcccgcacgcagctgatttcagcgatgaagatt
ctgcagaccggtgatattgaccgcggacatctgagcggttcatgggccggtgcaatgggg
cacacccagtttatcccaaccagctatcaagcctatgcggtagattttgacggtaatggc
aaacgcgatatctggaattccgtgccggatgcgctggcaacggctgccaatcttctgcgt
aaaaacggctgggagccaggccgcacatggggttacgaagtggttctgcctgcttcgggt
aaattcccgtccggcagcctgagcattgctgaatggcgccgtctgggactggtgcgtgcc
aatggccgtccgttcccgagtgatgctgaaaaagccacgctgaaagtcatggatggccgt
agcggccctgccttcctgatgaccaagaatttcttcgttatcaagcgttataataatgcg
gataaatacgctctcggtgtgggtcttctggccgaccgcgttgccggttatcaaggtttg
gtgcaggactggaaccgtcctttcacaccaatctccatgaaagaacgtgaagaactgcaa
acgcatcttcgtgcacttggctattatgacggcaatattgacggcaaaatcggctcaagt
tcacgtaaggcaattgaggccttccagcagcgcaacgggctgtcacccgacggccatccg
agcaaagaagtgctcagcgttctgcgtcgccgctaa
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