Pseudochrobactrum algeriensis: KHQ08_14785
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Entry
KHQ08_14785 CDS
T07380
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pscq
Pseudochrobactrum algeriensis
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pscq03021
]
KHQ08_14785 (rpoH)
Transcription machinery [BR:
pscq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KHQ08_14785 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
HTH_11
Sigma70_r3
Sigma70_r4_2
UCR_14kD
KORA
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QVQ36391
LinkDB
All DBs
Position
2807544..2808419
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AA seq
291 aa
AA seq
DB search
MARATLPAITAGDGGLTRYLDEIRRFPMLQPQEEYMLAKRYSEHADPEAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVISEGNVGLMQAVKRFEPERGFRLATYAMWWIKASIQEYVLRS
WSLVKMGTTANQKRLFFNLRKAKNKIQALDDGDLNPEQVKEIAHRLSVSEEEVVSMNRRM
SGDASLNAPIRASEGESGEWQDWLVDDSASQEQVLIDEDELNSRRTMLESAMSKLNDRER
RIFEARRLAEEPVTLEDLSTEFGISRERVRQIEVRAFEKVQEAVMASAEAA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgcaactttaccggctatcaccgcaggtgatggtggtctgacacgatatctc
gatgaaatccgccgcttcccgatgcttcagcctcaggaagaatatatgcttgcaaaacgc
tatagcgagcatgctgatccggaagccgcccataaacttgttaccagtcacctgcgtctt
gtggccaagattgccatggggtatcgcggctacggcctgccgatcggtgaagtgatctct
gaaggtaatgtcggcctgatgcaggctgtcaaacgttttgaaccggaacgcggcttccgc
ctcgccacctatgccatgtggtggatcaaggcctcgattcaggaatatgtgctgcggtcg
tggagccttgtcaaaatgggtaccaccgcaaaccagaagcgcctgttcttcaatctgcgt
aaagctaagaataagattcaggcgctggatgacggcgatctgaaccctgaacaggtgaaa
gaaatcgctcaccgcctgagcgtttctgaggaagaagtcgtatccatgaaccgccgtatg
agcggcgacgcatctctgaatgcgccaatccgcgcttcggaaggtgaaagcggtgaatgg
caggactggctggtggatgacagcgcctctcaggaacaggttctgattgacgaagacgag
ctcaacagccgccgaaccatgcttgaatcagcaatgtccaagctcaatgaccgcgaacgc
cggatttttgaagcccgtcgtctggcagaggaaccggttacacttgaagatttgtcgacc
gaattcggcatcagccgtgagcgtgtccgtcagattgaagtccgcgcttttgaaaaagta
caggaggctgttatggcctctgcggaagctgcataa
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