Pseudochrobactrum algeriensis: KHQ08_14890
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Entry
KHQ08_14890 CDS
T07380
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pscq
Pseudochrobactrum algeriensis
Pathway
pscq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KHQ08_14890 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pscq03400
]
KHQ08_14890 (ruvB)
Enzymes [BR:
pscq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KHQ08_14890 (ruvB)
DNA repair and recombination proteins [BR:
pscq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KHQ08_14890 (ruvB)
RecFOR pathway proteins
KHQ08_14890 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
Rad17
AAA_22
AAA_14
AAA_18
AAA_16
AAA_2
AAA_17
nSTAND3
DUF815
AAA_24
RNA_helicase
AAA_33
MCM
AAA_28
TsaE
Sigma54_activ_2
Bac_DnaA
NB-ARC
ABC_tran
NTPase_1
AAA_7
IstB_IS21
Cytidylate_kin
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
QVQ36410
LinkDB
All DBs
Position
complement(2831138..2832178)
Genome browser
AA seq
346 aa
AA seq
DB search
MSDEDRLISAQKRGEDTDTALRPQSLDDFVGQAAARANLKIFIEAAKTRGEALDHVLFVG
PPGLGKTTLAQIMSKELGVNFRSTSGPVIAKAGDLAALLTNLEDRDVLFIDEIHRLSPAV
EEILYPAMEDYQLDLIIGEGPAARSVKIDLAKFTLVAATTRLGLLTTPLRDRFGIPVRLN
FYTVDELEYIVHRGARLMQLNISDDGAREIARRARGTPRIAGRLLRRVRDFALVAKADIV
DAKIADEALIRLEVDNIGLDQLDRRYLNMIARNFGGGPVGIETIAAGLSEPRDAIEDIIE
PYLIQQGFLQRTPRGRVLTALAWQHLGLTAPTDLAARQITLFEDEA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgaagatcgtctgatttctgcgcaaaagcgcggggaggatacggacacggct
ttgcgcccgcaaagccttgatgattttgtcggtcaggcggcagcacgcgctaatctgaaa
atttttatcgaagcagccaaaacccgaggtgaggcgctggatcatgtgttgtttgtcggc
cctccgggcttgggcaaaaccacattggcgcagattatgtccaaggaactcggcgttaat
ttccgttccacctcagggccggtgattgccaaagccggtgatctggctgcattgctcacc
aatcttgaagaccgcgatgtgctgtttatcgatgaaattcatcgtctcagccctgcggtg
gaagaaattctctatccggcgatggaagattatcagctcgatctgattatcggcgaaggg
cctgcggcacgctccgtcaagattgatctggcgaaattcacgctggtggcggcgacaacc
cgtctcggtcttctgaccacgcctttgcgcgaccgtttcggtattccggtacggctgaat
ttctatacggttgatgagctggaatatattgtgcaccgcggtgcacggctgatgcagctg
aatatttccgatgatggtgcacgcgagattgcgcggcgtgcacgcggaacaccgcgcatt
gcaggacgtttgctgcgccgtgtccgtgactttgcgctggtagcaaaagcagacattgtg
gatgcgaaaatcgccgatgaggcgctgatccgtctggaagtggataatattggtcttgat
cagctggatcgccgttatcttaatatgattgcacgcaattttggcggcggacctgtggga
attgagacgattgccgccggtctgtctgaaccccgcgatgcgattgaagatattattgaa
ccctatctgatccagcagggctttttgcagcgtacaccgcgcggtcgtgtgctgacagca
cttgcatggcagcatcttgggctgacggcaccgactgatctggctgcacggcagatcacc
ctgtttgaggacgaagcctga
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