Pseudochrobactrum algeriensis: KHQ08_15515
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Entry
KHQ08_15515 CDS
T07380
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pscq
Pseudochrobactrum algeriensis
Pathway
pscq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KHQ08_15515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pscq03019
]
KHQ08_15515
Messenger RNA biogenesis [BR:
pscq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KHQ08_15515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
QVQ36513
LinkDB
All DBs
Position
complement(2970123..2970644)
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AA seq
173 aa
AA seq
DB search
MKNMTEKRDPASLPYRPCVGIMVLNSEGKVWAGRRIIEPNGEMEGATQLWQMPQGGIDAG
ENPATASLRELYEETGMRSVSLLAEAPNWINYDLPEHLIGIALNGKYRGQTQRWFAYRFE
GDESEIAINPPPGGHDAEFDMWAWKPMMELPELIVPFKRPVYDEVIQAFRHLV
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacatgactgaaaagcgtgaccccgcatcgctgccttatcgcccctgtgtgggc
attatggttttgaacagcgaaggcaaagtctgggcaggacgccgtatcattgagccgaat
ggtgagatggaaggtgcaacgcagctttggcagatgccgcagggtggtattgatgccggt
gaaaatccggcaacggcatcgttgcgcgagctctatgaagaaacaggtatgcgtagcgtc
agtcttttggcagaagcgccgaactggatcaattatgacctgccggaacatctgatcggt
attgccttaaatggcaaatatcgcggtcagacacagcgctggtttgcctatcgttttgag
ggcgacgaaagcgagattgcaatcaacccgccaccgggcggacatgatgctgaatttgat
atgtgggcatggaaaccgatgatggagctgccggaactgatcgttccgttcaagcgccct
gtttatgacgaagtcattcaggctttcagacatctggtctga
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