Pseudochrobactrum algeriensis: KHQ08_17165
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Entry
KHQ08_17165 CDS
T07380
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pscq
Pseudochrobactrum algeriensis
Pathway
pscq03030
DNA replication
pscq03430
Mismatch repair
pscq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KHQ08_17165 (dnaQ)
03430 Mismatch repair
KHQ08_17165 (dnaQ)
03440 Homologous recombination
KHQ08_17165 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pscq03032
]
KHQ08_17165 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pscq03400
]
KHQ08_17165 (dnaQ)
Enzymes [BR:
pscq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KHQ08_17165 (dnaQ)
DNA replication proteins [BR:
pscq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KHQ08_17165 (dnaQ)
DNA repair and recombination proteins [BR:
pscq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KHQ08_17165 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QVQ36777
LinkDB
All DBs
Position
3299041..3299742
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AA seq
233 aa
AA seq
DB search
MREIVFDTETTGLEKNEDRVIEIGCIEMVNKFITGKTFHIYINPQGKKVHPDALAVHGIT
DESLLDKPTFPEIADEFLTFIEGAKLVAHNAMFDIGFLNAELERIDRTPISTDVVIDTLA
LARRKHPMGPNTLDALCKRYGVDNAHRKLHGALLDTELLAEVYIELLGGRQTSLGLSVQS
ANEDKNGNEPVADIVLKARPQPLPSRLTADDLAAHQKLIDKMGDKAIWKKYLN
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagattgttttcgatacagaaaccaccggccttgagaaaaatgaagaccgggtg
atcgaaatcggctgtatcgagatggtgaataaattcatcaccggcaaaacatttcatatc
tatatcaatccgcagggcaaaaaggttcatccggacgcattggctgttcatggtattacc
gatgaaagcctgctggataagccgacctttcctgaaattgcggatgagtttctgactttt
atcgaaggcgcaaaactggtcgcgcataatgcgatgttcgatatcggctttctgaatgcc
gaactggagcggattgaccggacaccgatttctaccgacgtggtgattgatacgctggct
ttggcgcgtcgcaagcatcctatggggccaaacacgctggatgcgctgtgtaagcgctat
ggcgtcgataatgcgcatcgtaaattgcacggtgcattgcttgatacagaattgctggca
gaagtttatattgagctgctcggcggccgtcagacatctttgggtctgagcgtacaatct
gccaatgaagacaagaacggcaatgaacctgttgccgatattgttctgaaagcacgccct
cagcccctgccctcacgcctgactgctgatgatcttgctgcgcatcagaagctcattgat
aaaatgggtgataaagcaatttggaaaaaatatttgaactga
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