Pseudoalteromonas sp. CuT4-3: VOI46_15485
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Entry
VOI46_15485 CDS
T11364
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pscu Pseudoalteromonas sp. CuT4-3
Brite
KEGG Orthology (KO) [BR:
pscu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VOI46_15485 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pscu03021
]
VOI46_15485 (rpoA)
03400 DNA repair and recombination proteins [BR:
pscu03400
]
VOI46_15485 (rpoA)
Enzymes [BR:
pscu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VOI46_15485 (rpoA)
Transcription machinery [BR:
pscu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VOI46_15485 (rpoA)
DNA repair and recombination proteins [BR:
pscu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VOI46_15485 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WRU72856
LinkDB
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Position
complement(3343870..3344856)
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AA seq
328 aa
AA seq
DB search
MQGSVTEFLKPRLVDIDAINPTRSKVVLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSAKEGVQEDIIEILLNLKGLAVTLEGKDEVFLTLTKSGVGPVTAADIQHDGD
VTIANPDHVICHLTTDSSEISMRIRVERGRGYVPASSRLSSDDDERPIGRLLLDASFSPV
ERIAYSVESARVEQRTDLDKLIIDMETNGTLDPEEAIRRASTILAEQLDAFVDLRDVTEP
EEKEEKPEFDPILLRPVDDLELTVRSANCLKAEQIQYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASLAE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttctaaaaccaaggttagtcgatatcgacgctatcaac
ccaacgcgttctaaagtagttttagaaccactagagcgtggctttggccatactctgggt
aatgccttacgccgtatactgttatcatctatgcctggatgtgcagtaactgaagttgaa
atcgacggtgtattgcatgagtacagcgcgaaagaaggcgtacaagaagacatcattgaa
atactactaaacctaaaaggtttagcagtaacgttagaaggcaaagatgaagtttttctg
accctgactaaatctggtgtaggccctgtgactgcggctgatattcagcacgatggcgat
gtaacaattgctaatccagatcacgttatttgtcatttaacgacagatagcagcgagatc
agcatgcgtattcgtgttgagcgtggtcgtggttatgtgccggcatctagtcgtttatcc
tctgatgacgatgagcgtccaattggtcgattgctgcttgatgcatcattcagcccagtt
gaacgtattgcgtactcggttgaatcagcccgtgttgagcaacgtacagacttagacaag
ttaatcattgatatggaaacaaacggcactttagatcctgaagaagcgatccgccgtgcg
tctactatcttagctgagcaattagatgcattcgtagatttacgtgatgtaactgagcca
gaagagaaagaagagaagccagaattcgatcctattctacttcgtccagttgatgatctt
gaactaacagtacgttcagcaaactgtttgaaagccgagcaaattcaatatatcggtgat
ttagttcagcgcactgaagttgagcttcttaaaacgcctaacctaggcaagaagtctcta
actgaaataaaagacgtgctagcttcacgtggtctttctctaggcatgcgcctagaaaat
tggccgcctgcaagcctagctgaataa
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