Pseudoxanthomonas spadix: DSC_01000
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Entry
DSC_01000 CDS
T01643
Symbol
recF
Name
(GenBank) recombination protein F
KO
K03629
DNA replication and repair protein RecF
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DSC_01000 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psd03400
]
DSC_01000 (recF)
DNA repair and recombination proteins [BR:
psd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DSC_01000 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
AAA_27
ABC_tran
CC2D1A-B_DM14
AAA_25
AAA_16
Aq_aa27
nSTAND3
AAA_13
AAA_22
CysA_C_terminal
ABC_ATPase
Zeta_toxin
DUF2813
Motif
Other DBs
NCBI-ProteinID:
AER54853
UniProt:
G7USZ2
LinkDB
All DBs
Position
2813..3892
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AA seq
359 aa
AA seq
DB search
MHVTRLAVGGLRRFAQVELAPKPGLNLITGDNGAGKTSLLEALHLMAWGRSFRGRVRDGL
IRTGSQAVEVFVEWREGQDDRIRRAGLRHSGQEWSGRLDGRNVGQLGELCAALAVVSFEP
GSHALVTGSGEPRRRFLDWGLFHVEQDFLPVWRRYNRALKQRNALLKSGGSGKQLDAWDV
ELAEAGEAVTAHRQAYLDRLQGQVQDVANALVPMLGRAQLEFAPGWRRQALSLADALLVS
RERDRQFGHTGVGPHRADWRVDFSALPQREALSRGQAKLTALSCLLAQSQDYAAQRGEWP
VLALDDLASELDRRHQASVLARVIQSGAQVLVTGTEMPAALEAVPLAWFHVEHDTIVGH
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtgacccgactggccgtgggcggcttgcgcaggttcgcgcaggttgaacttgcc
ccgaagcccggcttgaacctgatcaccggcgacaacggggccggcaagaccagcctgctc
gaagccctgcacctgatggcctggggccgcagttttcgcgggcgcgtgcgcgatggattg
atccgcaccggttcgcaggccgttgaggtcttcgtggagtggcgcgaaggccaggatgac
cggatccgccgtgcgggtctgcgccacagcgggcaggaatggagcggccgcctggatggc
cgcaacgtcggtcagctcggtgagctgtgtgcggcactggcggtggtgagcttcgagccg
ggcagccatgcactggtgaccggcagcggcgagccacggcgacgctttctggactggggc
ctgtttcacgtggaacaggatttcctcccggtctggcgtcgctacaaccgcgcgctgaag
cagcgcaacgccctgctcaagtccggcggcagcgggaaacagctcgatgcctgggacgtc
gagttggcggaggccggcgaagcggtgaccgcgcaccggcaggcatacctggaccggctg
caaggccaggtccaggacgttgccaacgcgctggtgccgatgctgggccgggcgcaactg
gaatttgcgccgggttggcgtcgccaagcgctgtcgctggccgatgcgctgctggtgtcg
cgggagcgcgatcgccagttcggccacaccggcgtgggcccgcatcgggcagattggcgg
gtcgatttcagcgccctgccccagcgcgaagcattgtctcgtggccaggccaagctgacc
gcgctgtcctgtctgctggcccagtcccaggactatgcggcccagcgtggggaatggccg
gtgctggccctggatgacctggcctccgagctggaccgccgtcaccaggccagtgtgttg
gctcgggtgatccagtccggcgcccaggtcctggtcaccggtactgaaatgccggcagca
ctggaagctgtgccgctggcgtggtttcacgtggaacacgacaccatcgtcggccactga
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