Pseudoxanthomonas spadix: DSC_01645
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Entry
DSC_01645 CDS
T01643
Name
(GenBank) Fis family GAF modulated sigma-54 specific transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
psd
Pseudoxanthomonas spadix
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psd03000
]
DSC_01645
Transcription factors [BR:
psd03000
]
Prokaryotic type
Helix-turn-helix
Other families
DSC_01645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_8
GAF
Sigma54_activ_2
AAA_lid_14
AAA_5
HTH_30
HTH_28
AAA_2
HTH_29
HTH_1
HTH_23
HTH_psq
Mg_chelatase
HTH_Tnp_1
PAS_8
AAA
HTH_IclR
HTH_Tnp_ISL3
HTH_22
PAS_9
HTH_7
AAA_16
nSTAND6
ATPase
Motif
Other DBs
NCBI-ProteinID:
AER54982
UniProt:
G7UU93
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Position
146729..148648
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AA seq
639 aa
AA seq
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MAQQQTLSDRHLGLARRAFFEHGGAPVGKVPETILRSWVRCQRQGLAAEQAPHIEPVPAA
RLQEMRERHEKLWRLARAELELLSSDAAATGSIVILTDEDGWILDAEGSASFLDRAGRVA
LMPGACWSEAQVGTNAIGTAIVEGRSVVVHGGEHYLTPHGILSCSACPIFDPYGLPVGVL
DISGDSNVQHMHALGLARLAVANIEHRYFDEGIPDAELLRLHRDPALLGTAREGLLAFRS
GRLVAANQAGLQLFGLDRSELGRAPYAALFEDALGKLRDDGVLLDRQGRALYGRVDDGQA
RPRRPAARPPITVSAALTPQPADAPLFDPVQEADLVRACRVLDAGLSVLVQGQTGTGKEV
FARELHRRCARAGKPFVAVNCAALPEGLIEAELFGYEDGAFTGARKNGNPGLLRQADGGV
LFLDEIGDMPLALQPRLLRVLQERELSPLGGGKPIKLDFALVCATHREMQQAMGEGRFRP
DLYYRIAHHTVHIAPLSANADRAAVVDALWQRLGQGRRLTEQARQQLADYSWPGNLRQLG
ACLRTLVALSEPGALVGVELLPAYLHDLRPAASRAQTPANPMLASPAASASPLEALAEAA
MRQALAECDGNVSRAARKLGISRSTLYRRLGQDLHGKPH
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcagcaaaccctgtcggaccggcatctgggcctggcccgacgcgcattcttc
gaacacggcggcgcgccggtgggcaaggtgcccgagaccatcctgcgctcgtgggtgcgc
tgccagcgccagggcctggccgccgagcaagccccgcacatcgagccggttccggccgcg
cgcctgcaggaaatgcgcgagcgccacgagaaactctggcgcctggcgcgcgccgaactg
gaactgctgtcttcggatgcggccgccaccggcagcatcgtcatccttaccgacgaggac
ggctggatcctggatgccgagggcagcgccagtttcctggaccgcgccggccgggtggcg
ctgatgccgggcgcgtgctggagcgaggcgcaggtcggcaccaatgccatcggcaccgcg
atcgtggaaggccgctcggtggtggtccatggcggcgagcattacctgaccccgcacggg
atcctgagctgttcggcctgcccgatcttcgacccgtacgggctgccggtgggcgtgctg
gacatttccggcgattccaacgtgcagcacatgcacgcgctgggattggcgcgactggcg
gtggccaacatcgagcatcgttacttcgatgagggcattcccgacgcggagctgctgcgc
ctgcaccgcgatccggcgctgctggggaccgcgcgtgaagggctgctggccttccgcagc
ggccgcctggtcgcggccaaccaggccgggctgcagttgttcggcctggaccgcagcgag
ctgggacgcgccccgtacgcggccctgtttgaagatgcactgggcaagttgcgcgacgac
ggggtgctgctggaccgccagggccgggcgctgtatggccgggtggacgacggccaggca
cgccccaggcgcccggccgcgcggccgccgatcaccgtctcggccgcgctcaccccgcag
ccggccgacgcgccgctgttcgacccggtccaggaagccgacctggtccgcgcctgccgg
gtgctcgatgccggcctgtcggtgctggtgcagggccagaccgggaccggcaaggaagtg
ttcgcccgcgaactgcaccgacgctgtgcgcgcgccggcaagccgttcgtggcggtcaac
tgcgcggccctgcccgaaggcctgatcgaagccgaactgttcggctatgaggacggcgcc
ttcaccggtgcgcgcaagaacggcaacccgggcctgctgcgccaggccgatggcggggtg
ctgttcctggacgagatcggcgacatgccgctggccctgcagccgcgcctgctgcgggtg
ctgcaggagcgcgagctgtcaccgttgggcggcggcaagccgatcaagctggatttcgcc
ctggtctgcgcgacccaccgcgagatgcaacaggccatgggcgagggccgcttccgcccc
gacctgtactaccgcatcgcccaccacaccgtgcacatcgccccgctcagcgccaatgcc
gatcgtgctgccgtggtggatgcgctgtggcagcgcctgggccagggccgcaggctcacc
gagcaggccaggcagcagctggccgactacagctggccgggcaacctgcgccagctcggt
gcctgcctgcgcaccctggtggcgttgagcgaacccggcgcgctggtcggcgtcgaactg
ctgccggcctacctgcacgacctgcgcccggcagccagccgcgcgcaaacgccggccaat
cccatgctggccagtcccgcagcgtcggcttcaccgctggaggcgctggccgaggcggcc
atgcgccaggccctggccgaatgcgatggcaacgtcagccgcgccgcacgcaagctgggc
atcagccgcagcaccctgtaccgccgcctgggccaggacctgcacggcaagccgcattag
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