Pseudoxanthomonas spadix: DSC_02185
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Entry
DSC_02185 CDS
T01643
Name
(GenBank) carbamoyl-phosphate synthase L chain ATP-binding protein
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd00280
Valine, leucine and isoleucine degradation
psd01100
Metabolic pathways
Module
psd_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DSC_02185
Enzymes [BR:
psd01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
DSC_02185
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
BT_MCC_alpha
ATP-grasp
Dala_Dala_lig_C
GARS_A
HlyD_3
Biotin_lipoyl_2
ATPgrasp_ST
LAL_C2
ATP-grasp_3
ATP-grasp_5
ATP-grasp_4
SIS
Motif
Other DBs
NCBI-ProteinID:
AER55090
UniProt:
G7UV11
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All DBs
Position
complement(258667..260643)
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AA seq
658 aa
AA seq
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MFEKILIANRGEIACRIIATCRRLGIATVAVYSDADAHARHVRLADEAWRLGPAPAVDSY
LKAEAILEIAARSGAQAIHPGYGFLSENAGFAAACQAAGIVFIGPPVGAIQAMGSKSQAK
AIMQRAGVPLVPGYHGADQDPAQLQAQAEAIGYPVLIKASAGGGGKGMRVVTQAGDFAAA
LASCKRESAASFGDDTVLLERYLQQPRHIEVQVFADASGQVIHLNERDCSSQRRHQKVVE
EAPAPGMTAARRAQMGQVACDAARAVGYVGAGTVEFIVGQDGAFYFMEMNTRLQVEHPVT
ELVTGLDLVEWQLRIAAGQPLPLTQEAVALDGHAIEARLYAEDPAAGFLPSIGTLSVFVA
PRQQEHQVRLDTGVEQGDQISPYYDPMIAKLIVHGPSRPQAIARMQRALAELRIVGVASN
VEFLQRLVGHPAFVAGQVDTGLIERESAALLPAAAAPPQDALHAAAIWTVLAEAPDASRP
PSPWDLGDGWRLNGSARRTLGFVHPAGTREIALEYQGAQAWSLDGQPVRLVQPPQAGRLQ
LDIAGHVLTAEVFAQGQDLHVFTAQGHTRLKPQRPLTPPEDAQDHQAGLLAPMPGRIITL
LVQPGATVEQGTPLLVMEAMKMEYTLSAPFKGIVLAFLHDEGAQVQAGMELIDFQAAP
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaagatcctcatcgccaaccgtggcgagatcgcctgcaggatcatcgccacc
tgccggcgcctgggcatcgccaccgtggcggtgtactcggatgccgatgcgcacgcacgc
cacgtgcgcctggccgatgaagcctggcggctgggcccggcgccggcggtggacagctat
ctcaaggccgaggcgatcctggagatcgccgcccgcagcggtgcccaggccatccacccc
ggctatggcttcctctcggagaacgcaggctttgctgcggcctgccaggccgccggcatc
gtcttcatcggccccccggtgggcgcgatccaggccatggggtccaagtcccaggccaag
gccatcatgcagcgcgccggcgtgcccttggtgcccggctaccacggcgccgaccaggac
ccggcgcagctgcaggcccaggccgaggcgattggttatccggtgctgatcaaggcctcg
gccggtggcggcggcaagggcatgcgcgtagtgacccaggccggcgactttgccgcggcg
ctggcctcgtgcaagcgcgaatcggccgccagcttcggcgatgacaccgtgctgctcgag
cgatacctgcagcaaccgcgccatatcgaagtccaggtgttcgccgacgccagcggccag
gtgatccatctcaacgagcgcgattgctcgtcccagcgccgccaccagaaggtggtcgag
gaagcgcccgcgcccggcatgaccgccgccaggcgcgcgcagatgggccaggtggcctgc
gacgcggcgcgggcggtgggttacgtgggcgccggcacggtggagttcatcgtcggccag
gacggcgcgttctacttcatggaaatgaacacccgcttgcaggtggagcatccggtcacc
gagctggtcaccggcctggacctggtggaatggcagctgcgcattgccgccggccagccg
ctgccgctgacgcaggaggcggtcgcactggacggccatgcgatcgaggccaggctgtat
gccgaagacccggctgccggcttcctgccttcgatcggcaccctgtcggtgttcgtcgcg
ccgcgccagcaggagcatcaggtgcgcctggataccggcgtcgaacagggtgaccagatc
agcccgtactacgacccgatgatcgccaagctgatcgtccatggcccatcgcggccgcag
gccatcgcccgcatgcagcgcgcgctggccgagctgcgcatcgtgggggtggccagcaac
gtcgagttcctgcagcggctggtggggcatccggcgttcgtcgccggccaggtggacacc
ggcctgatcgaacgcgaaagcgccgcgctgctgcccgccgccgccgcgccgccgcaggac
gcgctgcatgccgccgcgatctggaccgtgctggccgaagcgcccgatgccagccggccg
ccctcgccgtgggacctgggcgatggctggcgcctcaacggcagcgcccggcgcacgctc
ggcttcgtccatcccgccggcacgcgggagatcgcgctcgagtatcaaggcgcgcaggca
tggagcctggatggacagccggtgcgcctggtccagccgccgcaggcgggacggctgcag
ctggacatcgccggccacgtgctgacggccgaagtgttcgcgcaaggccaggacctgcat
gtgttcaccgcccagggccacacccggctcaagccgcagcggccgctgaccccgcccgag
gatgcgcaagatcaccaggccggcctgctggcgccgatgcccgggcggatcattacgctg
ctggtgcaacccggcgcgaccgtggagcagggcacaccgctgctggtgatggaggcgatg
aagatggagtacaccctgagcgcgccgttcaaggggatcgtcctggccttcctgcacgac
gagggcgcgcaggtccaggccgggatggagctgatcgatttccaggccgcgccatga
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