Pseudoxanthomonas spadix: DSC_02325
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Entry
DSC_02325 CDS
T01643
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psd
Pseudoxanthomonas spadix
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psd03032
]
DSC_02325
03400 DNA repair and recombination proteins [BR:
psd03400
]
DSC_02325
Enzymes [BR:
psd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DSC_02325
DNA replication proteins [BR:
psd03032
]
Prokaryotic type
DNA Topoisomerases
DSC_02325
DNA repair and recombination proteins [BR:
psd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DSC_02325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Glucan_synthase
Motif
Other DBs
NCBI-ProteinID:
AER55118
UniProt:
G7UVK1
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All DBs
Position
295595..296716
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AA seq
373 aa
AA seq
DB search
MVRSDRAAAAACACSKAPAPSQAADIARLAGLVYVTDADPGYARRRAGKGFSYRDRQGHA
VRDAATLARIGALAIPPAYTEVWICMDARGHLQATGRDARRRKQYRYHPRWIEVSGEGKY
DRIVQFGATLPRLRRRLRQDLGLPGFPREKVLAIVVAVMAETLVRVGNATYARDNRSFGL
TTLRNRHAAFARDRVRLQFRGKGGLEHDIGIDDARLVKLIRAVQHLPGQALFQYRDDEGT
LQPVDSGQVNAYLRQVMGQDFTAKDFRTWGGTLAAFKLLAATPVPAPPSKAALTRARNAV
IKEVARALGNTPAVARKAYIDPCMFQAWEDGRLQTLAATVRGQRQWEQAALKLLSRVHKV
SLRSARKVAAATR
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggtcagatccgatcgcgccgccgctgcagcttgcgcttgctccaaggcccctgcgcct
tcgcaagccgccgacatcgccaggctggccggcctggtctacgtcaccgatgccgatccg
ggctacgcacgccggcgcgcgggcaaggggttcagctaccgcgatcggcagggccatgcg
gtgcgcgatgcggcgaccctggcgcgcatcggcgcgctggccattccaccggcctacacc
gaggtgtggatctgcatggatgcgcgcggccacctgcaggccaccgggcgcgatgcgcgc
cggcgcaagcagtaccgctaccatccgcgctggatcgaggtcagcggcgagggcaagtac
gaccggatcgtgcagttcggtgcgaccctgcccaggctgcgtcggcgcctgcgccaggac
ctgggcctgcccggctttccgcgcgagaaggtgctggcgatcgtggtggcggtgatggcc
gagaccctggtgcgcgtcggcaacgcaacctacgcgcgcgacaaccgttccttcggcctg
accacgctgcgcaaccggcatgcggccttcgcccgcgaccgggtgcggctgcagtttcgc
ggcaagggcgggctggagcatgacatcggcatcgatgatgcgcgtctggtcaagctgatc
cgtgcggtccagcacctgccggggcaggccctgtttcagtaccgcgacgatgagggcacg
ctgcagccggtcgattcgggtcaggtcaacgcctacctgcgtcaggtgatggggcaggac
ttcaccgccaaggatttccgcacctggggcgggacgctggctgcgttcaagctgctggcc
gccacaccggtgcccgcgccgcccagcaaggccgcgctgacccgcgccaggaacgcggtg
atcaaggaggtggcccgggcgttgggcaacacccctgcggtggcgcgcaaggcctacatc
gacccgtgcatgttccaggcctgggaagacgggcggctgcagacgctggccgccaccgtg
cgtggccagcgccagtgggaacaggccgcgctcaagctgctgtccagggtgcacaaggtg
tcactgcgcagcgcgcgcaaggtagccgcggccacacgctga
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