Pseudoxanthomonas spadix: DSC_03060
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Entry
DSC_03060 CDS
T01643
Name
(GenBank) RNA polymerase sigma-28 subunit FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd02020
Two-component system
psd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DSC_03060
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DSC_03060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psd03021
]
DSC_03060
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psd02035
]
DSC_03060
Transcription machinery [BR:
psd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DSC_03060
Bacterial motility proteins [BR:
psd02035
]
Flagellar system
Flagellar assembly proteins
Stator
DSC_03060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AER55265
UniProt:
G7UWF2
LinkDB
All DBs
Position
complement(452680..453432)
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AA seq
250 aa
AA seq
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MNALAARSYRAHQNGSASDIVERHGELVRRIAHHLAARLPASVEIDDLIQAGMLGLIEAA
RNYQADQGATFETYASIRIRGAMIDQMRRGDWTPRSVHRNYRQMIAAVRRIEQSTGRAAS
PAQVAAAMEIPLEEYHQLVEDAARGQLSSLDAHMDEHDGEPQLATADHATPARAFEDQAF
RGALAEAIASLPEREGLVLSLYYEQELNLREIGAVLAVSESRACQIHGQAMVRLRARLAD
WKREPQDPED
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccttgccgccagaagctatcgcgcccaccagaacggctcggccagcgacatc
gtcgaaaggcacggcgagctggtccgccgcatcgcccaccacctggccgcgcggctgccg
gccagcgtggagatcgacgacctgatccaggccggcatgctcggcctgatcgaggcggcc
cgcaactaccaggccgaccagggcgcgaccttcgagacctacgcgtccatccgcatccgc
ggggcgatgatcgaccagatgcgccgcggcgactggaccccgcgttcggttcatcgcaac
taccggcagatgatcgccgcggtgcgccggatcgagcagtccaccggccgcgccgcaagc
ccggcccaggtggccgcggcgatggagatcccactggaggaatatcaccagctggtcgag
gacgctgcccgcggccagctctccagcctggacgcgcacatggacgagcacgacggcgaa
ccgcaactggccaccgccgaccacgccaccccggcacgcgcgttcgaggaccaagcattc
cgcggcgccctggccgaggccatcgccagcctgcccgagcgcgaaggcctggtgctctcg
ctctattacgagcaggaactgaacctgcgcgagatcggcgcggtgctggcggtcagcgaa
tcgcgggcctgccagatccatggccaggccatggtccgcctgcgcgcccgcctggccgac
tggaagcgcgagccgcaggacccggaagactga
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