Pseudoxanthomonas spadix: DSC_03990
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Entry
DSC_03990 CDS
T01643
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd03420
Nucleotide excision repair
psd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSC_03990
03430 Mismatch repair
DSC_03990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psd03400
]
DSC_03990
Enzymes [BR:
psd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSC_03990
DNA repair and recombination proteins [BR:
psd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSC_03990
MMR (mismatch excision repair)
Other MMR factors
DSC_03990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
cobW
MobB
Motif
Other DBs
NCBI-ProteinID:
AER55451
UniProt:
G7UNV0
LinkDB
All DBs
Position
complement(663913..665010)
Genome browser
AA seq
365 aa
AA seq
DB search
MSSVPSPNRVLLSAAGSGKTTLLVRQALERPGRRIAIVTYTLENLEEIRRSFEVHAGAVP
AHVTLHSWYGFLLRQCIRPYQAALCPEPRIETILFVEGVTNNRAPRTQVARHYLAGNRMY
SDRAADFAVRCDELTQGQVMARLAAMYDELYIDEVQDLAGFDLDLVERLLKSDIAITLVG
DTRQATYATNYAQRHSQYRGPNLAALFQIWESDGLCQLDHRLISLRCVQALCDMADTLYP
QMPPTQSGNGEVTGHDGIYLVAPGDVAAYVQEFAPTVLRHDRRQACDGLPAVNFGQCKGR
TYSRVLIFPNGPLTQYLRTADAARITAPPKYYVAFTRARQSVAFVYAGACALPGHQLYIP
ASAST
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgtgccatcgcctaaccgggtactgctctcagcggccggctctggcaagacc
acgctgctggtccggcaggccttggagcgacctgggcgccgcatcgccattgtcacctac
acgctggaaaaccttgaagagatccggcgctcgtttgaggtccacgccggcgcggtcccc
gcgcatgtcaccttgcacagctggtatggcttcctgctgcgccagtgcatccgcccgtac
caggcggcactgtgccctgagcctcgcatcgagaccatcctgttcgtagaaggcgtcacc
aacaaccgggccccacgcacacaggtagcgcgccactacctggcaggcaaccggatgtat
tcggaccgggcggccgactttgctgtgcgctgcgatgagctgacccaaggtcaggtcatg
gcgcgcctggcggccatgtacgacgagctctacatcgacgaagttcaggacctggccggc
tttgatctggatctggtcgagcggctgttgaagagcgatatcgccatcacgttggtgggt
gatacgcgccaggcgacgtatgccaccaactatgcgcaaaggcacagccagtatcgtggg
cccaatctggcagcgctgtttcagatctgggagtcggacggcttatgccagctggatcac
cgcctcatcagtctgcgctgcgttcaggccctgtgcgatatggctgacacgctctatccg
cagatgccgccgacccaatcaggcaatggcgaggtcaccgggcacgatggcatctacctc
gtcgctccaggggatgttgcggcgtacgtgcaggagtttgcccccaccgtgcttcggcat
gatcggcggcaagcctgcgacggactaccagcggtgaactttgggcagtgcaagggccgc
acctacagtcgggtccttatctttccgaacgggccgttgacgcagtacctgcgcacggcc
gatgcggcgcgcatcaccgcgccaccgaagtactacgtggccttcacccgggcacggcaa
agcgtggcctttgtgtatgccggcgcgtgcgccttgccgggtcatcagctctacatccct
gccagcgcaagcacatag
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