Pseudoxanthomonas spadix: DSC_05260
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Entry
DSC_05260 CDS
T01643
Name
(GenBank) Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DSC_05260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psd02022
]
DSC_05260
02035 Bacterial motility proteins [BR:
psd02035
]
DSC_05260
Two-component system [BR:
psd02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
DSC_05260
Bacterial motility proteins [BR:
psd02035
]
Pilus system
Twitching motility proteins
DSC_05260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
AAA_19
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AER55703
UniProt:
G7UQ91
LinkDB
All DBs
Position
complement(937985..939430)
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AA seq
481 aa
AA seq
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MSDPRSALIVDDERDIRELLTLTLGRMGLRIDTAANVGEARELLARNPYDLCFTDMRLPD
GNGIELVEEISRNFPRTPVAMITAFGNVELAVEALKAGAFDFVSKPVDINVLRGLVRHAL
ELNNSERPAPAPAPAQHAMRLLGDSPAMAELRQTIAKVARSQAPVYILGESGVGKELVAR
TIHEQGGRAAGPFIPVNCGAIPAELMESEFFGHKKGSFTGAHADKQGLFQAASGGTLFLD
EVAELPLPMQVKLLRAIQEKAVRPVGASGETQVDVRILSATHNDLGELAQDGRFRHDLYY
RINVIELRVPPLRERTGDLPLLTGAILTRLAGHQQRSAPHLTAAALEALARYPFPGNVRE
LENILERAMAMADGEAIDAGDLRLPQAERRAPAPLAALPPAQDHDPFRPNPGPFGSPPPA
NGAPAGNGDAEGPLPSYIEQMERAAIHKALEDNRWNKTKAAAQLGITFRALRYKLKKLGI
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacccccgtagcgccctgatcgtcgatgacgaacgcgacatccgagagctgctg
accctgaccctgggtcgcatgggccttcggatcgacaccgccgccaatgtcggcgaagcc
cgcgagctgctggcccgcaacccctacgacctgtgcttcaccgacatgcgcctgcccgac
ggcaatggcatcgagctggtcgaggagatctcgcgcaatttcccccgtacgccggtggcc
atgatcaccgccttcggcaatgtcgaactggcggtggaggcgctcaaggccggcgccttc
gacttcgtcagcaagccggtggacatcaacgtgctgcgcggcctggtccgccacgcgctg
gagctcaataacagcgagcgccccgcgcctgcgcccgccccggcccagcacgccatgcgc
ctgctcggcgactcgccggccatggccgagctgcgccagaccatcgccaaggtcgcccgc
agccaggccccggtctacatcctgggcgagtcgggcgtgggcaaggagctggtcgcccgc
accatccatgagcagggcggccgcgcggccggtcccttcatcccggtcaactgcggcgcg
atcccggccgagctgatggaaagcgagttcttcggccacaagaagggcagcttcaccggc
gcccatgccgacaagcagggattgttccaggcggccagcggcggcaccctgttcctggac
gaggtggccgagctgccgctgccgatgcaggtcaagctgctgcgcgccatccaggaaaaa
gccgtgcgcccggtcggcgcctccggcgagacccaggtggacgtgcggatcctgtcggcc
acccacaacgacctgggcgaactggcccaggacggccgcttccgccacgacctgtactac
cgcatcaacgtcatcgagctgcgcgtgccgcccctgcgcgaacgcaccggcgacctgccg
ctgctgaccggcgccatcctcacccgcctggccggccaccagcagcgcagcgcgccgcac
ctgaccgctgccgcgctggaggccctggcccgctatcccttccccggcaacgtgcgcgag
ctggaaaacatcctggagcgggccatggccatggccgacggcgaggccatcgacgccggc
gacctgcgcctgccccaggccgaacgccgcgccccagcgccattggccgccctgccaccc
gcgcaggaccacgacccgttccgccccaatcccggcccgttcggcagcccgcccccggcc
aacggcgccccggccggcaacggcgatgccgagggcccgctgccctcctacatcgaacag
atggaacgcgccgccatccacaaggccctggaagacaaccgctggaacaagaccaaggcc
gccgcccagctgggcatcaccttccgcgccctgcgctacaagctcaagaagctgggcatc
gagtaa
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