Pseudoxanthomonas spadix: DSC_06855
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Entry
DSC_06855 CDS
T01643
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSC_06855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psd03019
]
DSC_06855
Enzymes [BR:
psd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
DSC_06855
Messenger RNA biogenesis [BR:
psd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DSC_06855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
AER56022
UniProt:
G7USF0
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All DBs
Position
1274146..1275399
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AA seq
417 aa
AA seq
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MLYRLRDAGFSAYLVGGAVRDLLVGQHPKDFDVATDATPEQIKQQFRNCRLIGRRFRLAH
VVFGREIIEVATFRANSDDGSGDRETHEDGRLLRDNVYGSIEDDAIRRDFTANALYYAIE
DFSVRDYCGGFEDVMARRLRLIGDPEQRYREDPVRMLRAVRLAAKLGFTIDGPTADPIPV
LAPLLAEAAPARLFEEILKLFLSGNAVASFQGLEHSGLLPVLLPESAAALQSNRSGALRA
MLLEGLAGTDARVANDEPVSPAFLFALLLWPAYCKALIGLQAQGVHPEEAARRAADRVTV
HQLNTIALPRRFSLPMQEIWLLQSRFSQRQRKRVTRLLAHPRFRAAFDFLVLRQSASPDH
AADVEFWTQAQTQTNEELAATLGVEVPGDSYTDEDAVPSKRRRRRRRRSGAAGASGE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtatcgcctgcgcgatgccggcttctcggcgtatctggtcggtggcgcggtccgc
gacctgctggtcgggcagcacccgaaggatttcgacgtggccaccgacgccacgcccgag
cagatcaagcagcagttccgcaactgccggctgatcggccgccgcttccgcctggcgcac
gtggtgtttggccgcgagatcatcgaggtcgccaccttccgcgccaacagcgacgacggc
agcggcgaccgcgaaacccacgaggatggccgcctgctgcgcgacaacgtctacggctcg
atcgaggacgacgcgatccgccgcgacttcaccgccaacgcgctgtattacgcgatcgag
gatttttcggtgcgcgactactgcggcggtttcgaggacgtgatggcgcggcggctgagg
ctgatcggcgatcccgaacagcgctaccgcgaagacccggtgcggatgctgcgcgcggtg
cgcctggcggccaagctgggtttcaccatcgatgggcccaccgccgacccgatcccggtg
ctggcgccgctgctggccgaggccgcgccggcgcggctgttcgaggagatcctcaagctg
ttcctgtccggcaacgcggtggccagcttccagggcctggagcacagcggcctgctgccg
gtgctgctgccggaaagcgccgcggcgctgcagtccaaccgcagcggtgcgctgcgcgcg
atgttgctggaaggtctggccggcaccgatgcgcgggtggccaatgacgagccggtctcg
ccggcgttcctgtttgcactgttgctgtggccggcgtactgcaaggcgctgatcggcctg
caggcgcagggcgtccatccggaagaggccgcgcgccgggccgccgaccgggtcaccgtg
caccagctcaataccatcgcgctgccacggcgcttctcgctgccgatgcaggaaatctgg
ctgctgcagtcgcgcttctcccagcgccagcgcaagcgggtcacgcgcctgctggcccat
ccacgcttccgcgcggcgttcgatttcctggtgctgcgccagtcggcctcgcccgaccat
gcggccgacgtggagttctggacccaggcccagacccagaccaacgaggagcttgccgcg
accctgggcgtggaggtgcccggcgacagctacaccgacgaagatgcggtgccgtccaag
cgccgccggcgccgtcgtcgtcgcagtggcgctgcgggcgcaagcggggaatga
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