KEGG   Pseudoxanthomonas spadix: DSC_07210
Entry
DSC_07210         CDS       T01643                                 
Name
(GenBank) type I site-specific deoxyribonuclease (restriction subunit)
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
psd  Pseudoxanthomonas spadix
Brite
KEGG Orthology (KO) [BR:psd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:psd02048]
    DSC_07210
Enzymes [BR:psd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     DSC_07210
Prokaryotic defense system [BR:psd02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   DSC_07210
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 ResIII HSDR_N DEAD PBP_GOBP T2SSF SNF2-rel_dom
Other DBs
NCBI-ProteinID: AER56093
UniProt: G7UT28
LinkDB
Position
1356283..1359303
AA seq 1006 aa
MHVKESSIEQELIDKLGELKYTLRPDIRDRAAMERNFREKFQALNRVSLTNAEFQRLLDE
IVTPDVFKAAQTLRHRNAFTRDDGTPLNYTLVNINDWCKNDFEVASQFRINTEYSYHRYD
VLLLINGVPAVQIELKTLGINPRRAIEQIVEYKNDPGNSYTRTLLCFIQLFIVSNRDFTY
YFANNNARHFAFNADERFLPIYQYAAPDNTKINGIDAFAEAFLAKCTLGQMISRYMVLVA
SEQKLLMMRPYQIYAVKNIVECIDKNLGNGYIWHTTGSGKTLTSFKASTLLKANPAIEKC
LFVVDRKDLDRQTREEFNRFQQGCVEENTNTGALVRRMLSDDAADKVIVCTIQKLGLALD
ENSKRNRSRERRGLASHTEQLEALRDKRIVFIFDECHRSQFGDNHQAIKEFFPKAQLFGF
TGTPIFEANASYKRIEGEEQTLKTTEDLFQQSLHEYTITHAIEDRNVLRFHVDYYKPDGK
RPPKPGETLAKRAIVDAILAKHDTATGGRRFNAILATASINDAIEYFKLFAVAQAEKQQA
DPHWQPLNIAAVFSPPADVSPDVRQLQEDLPQEQEDNKHDPEAKKNALKAIIADYNARFS
TNHRIEEFDAYYQDVQQRIKDQQFPNADLPHKGREKLDIVIVVDMLLTGFDSKYLNTLYV
DKNLKHHGLIQAFSRTNRVLNDTKPYGNILDFRGQQKEVDAAIALFSGAKADKAREIWLV
DTAPVVIDKLKDARGRLDRFMASQGLSGKPDDIANLKGDAARAAFVEHFKQVQKLKVQLD
QYTDLTPEQAQQIDQVLPRDEHNAFRGAYLETAQRLRAQQAKWSGQKDGAADEQIDQLDF
EFVLFASSTIDYDYIMKLIADYSAKAPGKASMSREQLIGLIASDAKFMDEREDISEYVRG
LKAGEGLNEAAIRAGYERFKQDRAAQEMAALSDKHGLPVTALRAFVDAILARRIFDGEQL
TELLSPLDLGWKARTQKELALMGDLLPLLNKRAGGREIAGLKAYEE
NT seq 3021 nt   +upstreamnt  +downstreamnt
atgcacgtcaaggaaagctccatcgagcaggagctgatcgacaagctcggagagctcaag
tacaccctgcgcccggacatccgtgaccgtgcggccatggagcgcaacttccgtgagaag
tttcaggcgctgaaccgggtcagcctgaccaatgccgagttccagcgcctgctggacgag
atcgtcacgccggacgtgttcaaggccgcccagacgctgcgccaccgcaacgcgttcacc
cgcgacgacggcacgccactcaactacacgctggtcaatatcaacgactggtgcaaaaac
gacttcgaggtcgccagccagttccgcatcaataccgagtacagctatcaccgctatgac
gtgctgctgctcatcaacggcgtgccggcggtgcagatcgagctgaagaccctgggcatc
aacccgcgccgggccatcgagcagatcgtcgagtacaagaacgacccgggcaacagctat
acccgcacgctgctgtgcttcatccagctgttcatcgtcagcaaccgtgacttcacctac
tacttcgccaacaacaacgcacgccacttcgcgttcaacgcggacgaacgcttcctgccg
atctaccagtacgccgcgccggacaataccaagatcaacggcatcgacgccttcgccgaa
gcgttcctggccaagtgcacgctcgggcagatgatcagccgctacatggtgctggtggcc
agcgagcagaagttgttgatgatgcggccctaccagatctatgcggtcaagaacatcgtc
gagtgcatcgacaagaacctcggcaacggctacatctggcacaccaccggcagcggcaag
acgctcaccagcttcaaggcctccaccctgctcaaggccaacccggccatcgagaagtgc
ctgttcgtggtggaccgcaaggacctggatcgccagacccgcgaggaattcaaccgcttc
cagcaaggctgcgtcgaggaaaacaccaacaccggcgcactggtgcgtcgcatgctgtcc
gacgatgcggccgacaaggtcatcgtttgcaccatccagaagctgggcctggcgctggac
gaaaacagcaagcgcaacaggagccgcgaaaggcgcgggctggccagccacaccgagcag
ctcgaagcgctgcgcgacaagcgcatcgtcttcatcttcgacgaatgccaccgctcgcag
ttcggcgacaaccaccaggccatcaaggagttcttccccaaggcccagctgttcggcttt
accggcacgccgatcttcgaggccaacgccagctacaagcgcatcgagggcgaagagcag
acgctcaagaccaccgaagacctgttccagcagtccctgcacgaatacaccatcacccac
gccatcgaggacaggaacgtcctgcgcttccacgtggactactacaaacccgacggcaaa
cgcccgcccaagcccggcgaaacgctggccaagcgcgccatcgtcgatgccatcctggcc
aagcacgacaccgccaccggcgggcgccgcttcaatgccatcctcgccaccgcatcgatc
aacgacgccatcgaatacttcaagctgttcgcggtggcgcaggccgagaagcagcaggcc
gacccgcactggcagccgctcaacatcgccgccgtgttctccccgccagccgacgtcagc
cccgatgtcaggcagctgcaggaggacctgccgcaggagcaggaagacaacaagcacgat
cccgaggccaagaagaacgcgctcaaagcgatcatcgccgactacaacgcgcgcttttcc
accaaccaccgcatcgaggagttcgacgcctactaccaggacgtgcagcagcgcatcaag
gaccagcagttccccaatgccgacctgccgcacaagggccgcgagaagctggacatcgtg
atcgtggtggacatgctgctcaccggcttcgacagcaagtacctcaacaccctgtacgtg
gacaagaacctcaagcaccacggcctgatccaggccttcagccgcaccaaccgcgtgctc
aacgacaccaagccctacggcaacatcctcgacttccgcggccagcagaaggaggtggat
gcggccatcgcgctgttctccggcgccaaggccgacaaggcgcgggagatctggctggtc
gacaccgcgcccgtggtcatcgacaagctgaaggacgcgcgcggcaggctcgaccgcttc
atggcctcgcaggggctcagcggcaagccggacgacatcgccaacctcaagggcgacgcc
gcccgcgccgccttcgtcgagcacttcaagcaggtgcagaagctcaaagtgcagctggac
cagtacaccgacctcacacccgaacaggcgcagcagatcgaccaggtgctgccgcgcgac
gagcacaacgccttccgtggtgcctatctggaaaccgcgcagcggctgcgcgcccagcag
gccaagtggtcaggccagaaagacggggcggccgatgagcagattgaccagctcgatttc
gagttcgtgctgtttgcctccagcaccatcgattacgactacatcatgaagctgatcgcc
gactactcggccaaggcgcccggcaaggccagcatgagccgcgagcagctgatcggcctg
atcgcctctgatgccaagttcatggacgagcgcgaggacatcagtgagtacgtgcgtggc
ctcaaggccggcgaagggctcaacgaggccgccatccgcgccggctacgaacgtttcaag
caggacagggcggcgcaggaaatggccgcgctgtccgacaagcacggtctgcccgtgacc
gcgctgcgggccttcgtcgatgccattctcgcccgccgcatcttcgacggcgaacagctc
accgagctgctttcgccgctcgatctgggctggaaggcgcgcacgcagaaggaactggcg
ctgatgggcgatctgttgccgttgctgaacaagcgggcgggtggacgcgagattgccggg
ctcaaggcgtacgaggaatga

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