Pseudoxanthomonas spadix: DSC_07785
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Entry
DSC_07785 CDS
T01643
Name
(GenBank) ribosomal large subunit pseudouridine synthase b (rrna pseudouridylate synthase b) protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
psd
Pseudoxanthomonas spadix
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psd03009
]
DSC_07785
Enzymes [BR:
psd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DSC_07785
Ribosome biogenesis [BR:
psd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DSC_07785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AER56208
UniProt:
G7UTV5
LinkDB
All DBs
Position
complement(1487630..1489210)
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AA seq
526 aa
AA seq
DB search
MSDTPRSKLSLKRDAAAIPEVRLQERLHKVLAQAGLGSRRALEQRIADGLIKVNGEVAQT
GMSIGSGDRVELDGRTFVASALTEPARVLIYNKPEGEVTTREDPEGRPTVFESLPAIKGA
RWIAIGRLDINTTGLLLLTTDGELANAMMHPSHEVSREYVVRVRAPEGQDTVSDALVERL
RNGVELEDGPAKFDEIERIGGTDSHDWYRVALKEGRNREVRRLWESQGCQVSRLKRTRYG
AIELPQPLLRGQSQELSDGQVQALRKSLKLEDGAPAALTLQPVIGQRRASRTVVNARGAG
NAYVNGHTTAADEARELRRFDHVREDRGRGGRGKPSFKGGLTVTGEAAANQSQKPFKTRA
AKGPKPLPDGNPAAFRSWYVPEGVDTGPTGHRNAGPGGPKKPYGGKPGGPRRGGPGAGLG
GSGPYGGFGEGARGQGVGQGAGQGQQRKARPYGHPGNAPSFPSDHATPGAYNPYGQRQGR
PGGGNRPAGGPRPGGAGPRPGANRGPGGKPGGPRGGSRGPRGGGNG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccccccgcagcaagctgtcgctgaagcgcgacgccgccgcaatccccgaa
gtccgcctgcaggagcgcctgcacaaggtgctggcccaggccggactcggctcgcgccgt
gcgctggagcagcgcatcgccgacggcctgatcaaggtcaacggcgaggtcgcacagacc
ggcatgtccatcggcagcggcgaccgggtcgagctggatggccgcaccttcgtcgccagc
gcactgaccgagccggcgcgggtgttgatctacaacaagcccgaaggcgaggtgaccacc
cgcgaggatcccgaaggccgcccgaccgtgttcgagtcgctgccggccatcaagggcgca
cgctggatcgccatcggccgcctggacatcaacaccaccggcctgctgctgctcaccacc
gacggcgagctggccaacgcgatgatgcatccgtcccacgaggtcagccgcgagtacgtg
gtgcgcgtgcgcgccccggaaggccaggacacggtgtccgacgcgctggtcgagcgcctg
cgcaatggcgtggagctggaagacggcccggccaagttcgacgagatcgagcgcatcggc
gggaccgattcgcacgactggtaccgggtcgccctcaaggaaggccgcaatcgcgaagtg
cgccgcctgtgggagtcgcagggctgccaggtcagtcggctcaagcgcacccgctacggg
gccatcgaactgccgcagccgctgctgcgcggccagtcgcaggaactgtccgatggccag
gtccaggcgctgcgcaagtcactcaagctcgaggatggcgcgccggccgcattgaccctg
cagccggtcatcggccagcgcagggcgtccaggaccgtggtcaacgcccgcggcgccggc
aatgcctacgtcaacggccacaccaccgcggccgacgaggcgcgtgagctgcgtcgcttc
gaccacgtgcgcgaggaccgtggccgcggcggccgcggcaagcccagcttcaagggcggc
ctgacggtcaccggtgaagcggcggccaaccagtcgcagaagcccttcaagacgcgcgcg
gccaagggtcccaagcccctgcccgatggcaacccggccgcgttccgcagctggtacgtg
cccgagggcgtggacaccggcccgaccggccaccgcaacgccggtcccggcggcccgaag
aagccctatggcggcaagcccggcggcccgcgtcgcggcggtcccggcgcaggcctcggt
ggcagcggtccctacggcggtttcggcgagggcgcgcgcggtcagggcgtcggccagggc
gccggccagggccagcagcgcaaggccaggccgtatggacatccgggcaacgccccgagc
ttcccgtccgaccatgccacgcccggcgcctacaacccgtacggccagcgccagggccgg
cccggtggcggcaaccggccggccggcggcccgcgtcccggcggcgccggcccacgtccg
ggcgccaatcgcggtcccggtggcaagcctggcggcccacgcggcggcagccgcggtccg
cgcggcggtggcaacggctag
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