Pseudoxanthomonas spadix: DSC_07900
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Entry
DSC_07900 CDS
T01643
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
psd
Pseudoxanthomonas spadix
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psd03032
]
DSC_07900
03400 DNA repair and recombination proteins [BR:
psd03400
]
DSC_07900
Enzymes [BR:
psd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DSC_07900
DNA replication proteins [BR:
psd03032
]
Prokaryotic type
DNA Topoisomerases
DSC_07900
DNA repair and recombination proteins [BR:
psd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DSC_07900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AER56231
UniProt:
G7UUE0
LinkDB
All DBs
Position
1521541..1524249
Genome browser
AA seq
902 aa
AA seq
DB search
MADLATEIIPVNLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELGAHSN
RPHFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTESRMSRLAHELMADIDKETVDFTPNYDEKEQEPSVMPTRFPNLLVNGSAGIAVGMAT
NIPPHNLSEVIDGLIAMIDNPLIEIDQLLEYIPGPDFPTAGIINGTAGIIAGYRTGRGRV
RMRARAEVEVDDRSGREAIIVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG
MRIYIEVKRGESAEVVLNNLYSQTPMESVFGINMVALVDGRPQLLNLKQMLEAFVRHRRE
VVTRRTIFELRKARARAHVLEGLTVALANIDEMIELIRTSANPGEARERMLARTWEPGLV
GSLLAAAGSESSRPEDLPKGVGFLDGRYQLTETQAQQILEMRLHRLTGLEQEKLTEEYKL
LLETIAGLIRILQNPDVLKQVIREELLNVKEEFGDARRSQIRQSEEDFDILDLIAPEDMV
VTLSHAGYAKRQPASSYRAQKRGGRGRNAATTKEEDFIDHLWLVNTHDTLLTFTSKGRVF
WLAVHQLPEAGPNARGRPIVNWIPLEADEKVQAVLPVREYAEGRFVFFATRNGTVKKTPL
TEFAYRLARGKIAINLDQGDALVGVALTDGQRDVLLFASNGKTVRFGEEAVRSMGRTATG
VRGIRLARGEHVVSLIVADRAAGADADQTDDEVADADEALEAAAEDTVLETSQDESGCYI
LTATENGYGKRTALAEYPRKGRGTQGVIGIQTNARNGKLVGALLLGNSDEVMLISDGGTL
VRTRSTEISRVGRNTQGVTLIRLSKGEKLQAIERLDASLEEGEELDAAAQGTDASSQIQP
EG
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggctgatctcgccaccgaaatcatcccggtcaacctcgaagacgagatgcgcaagagc
tacctcgattacgccatgagcgtgatcgtgggccgcgccctgcccgacgtgcgcgatggc
ctcaagccggtgcaccggcgggtgttgttcgcgatgcacgaactgggcgcgcacagcaac
aggccgcacttcaagtccgcgcgcatcgtcggcgatgtgatcggcaagtaccacccgcat
ggcgaccagtcggtatacgacaccctggtgcgcatggcccagccgttctcgctgcgctac
atgctggtcgatggccagggcaacttcggttcggtcgacggcgattcggccgcggccatg
cgctataccgagtcgcgcatgtcgcgcctggcccacgagctgatggccgacatcgacaag
gaaaccgtcgatttcacccccaactacgacgagaaggaacaggagccgtcggtcatgccg
acgcgcttcccgaacctgctggtcaacggctcggccggcatcgccgtgggcatggccacc
aacatcccgccgcacaatctgtccgaagtcatcgacgggttgatcgcgatgatcgacaac
ccgctgatcgagatcgaccagctgctggaatacatccccggcccggactttcccaccgcc
ggcatcatcaacggcaccgccggcatcatcgccggctatcgcaccggccgtggccgggtg
cgcatgcgcgccagggccgaggtggaggtggatgaccgcagcggacgcgaggcgatcatc
gtcaccgagatcccctaccaggtgaacaaggcgcggctgatcgagaagatcgccgagctg
gtcaaggaaaagaagctggagggcatcagcgagctgcgcgacgaatccgacaaggacggc
atgcgcatctacatcgaggtcaagcgcggcgaatcggccgaggtggtgctcaacaacctg
tattcgcagacgccgatggaatcggtgttcggcatcaacatggtcgccctggtcgacggc
cgtccgcagctgctcaacctcaagcagatgctggaagccttcgtccgccaccgccgcgag
gtggtcacccgccggaccatcttcgagctgcgcaaggcccgtgcccgcgcgcacgtcctg
gaaggcctgaccgtcgcgctggccaacatcgacgagatgatcgagctgatcaggacctcg
gccaaccccggcgaggcgcgcgaacgcatgctggccaggacctgggagccgggcctggtc
ggttcgctgctggctgcggccggcagcgagtcctcgcgtccggaagacctgcccaagggc
gtgggtttcctggacggtcgctatcagctgaccgagacccaggcccagcagatcctggaa
atgcgcctgcatcgcctgaccgggctggagcaggaaaagctcaccgaggaatacaagctg
ctgctggagaccatcgccggcctgatccgcatcctgcagaacccggatgtgctcaagcag
gtcatccgcgaggagctgctcaacgtcaaggaggaattcggcgatgcgcgccgcagccag
atccgccagagcgaggaagacttcgacatcctcgacctgatcgccccggaagacatggtg
gtcacgctctcccacgccggttacgccaagcgtcagccggccagcagctaccgcgcgcag
aagcgcggtggccgcgggcgcaacgcggccaccaccaaggaagaggatttcatcgatcac
ctgtggctggtcaacacccatgacacgctgctgaccttcaccagcaagggccgggtgttc
tggctggccgtgcaccagctgcccgaagccgggcccaatgcgcgcggccgcccgatcgtc
aactggatcccgctggaagccgacgagaaggtccaggcggtgctgccggtgcgcgaatat
gccgaaggccgcttcgtgttcttcgccacccgcaacggcacggtcaagaagaccccgctg
accgagttcgcctatcgcctggcgcgcggcaagatcgcgatcaacctggaccagggcgac
gcgctggtcggcgtggccctgaccgatggccagcgcgacgtgctgctgttcgcctccaat
ggcaagaccgtgcgcttcggcgaggaagcggtgcgctcgatgggccgcaccgccaccggc
gtgcgcggcatcaggctggccaggggcgagcacgtggtcagcctgatcgtggctgaccgt
gcggccggcgcggacgccgaccagaccgatgacgaggtggccgacgccgatgaagccctc
gaggctgccgccgaggacaccgtgctggagaccagtcaggacgaatcgggctgctacatc
ctcaccgccaccgagaacgggtatggcaagcgcaccgcgctggccgagtatccgcgcaag
ggccgcggcacccagggcgtgatcggcatccagaccaatgcccgcaatggcaagctggtc
ggcgcgctgctgctgggcaatagcgacgaggtgatgctgatctccgacggcggcaccctg
gtgcggacccgttcgaccgagatctcgcgggtgggccgcaacacccagggcgtgaccctg
atccgcctgtccaagggcgagaagctgcaggcgatcgagcgcctggatgcctcgctggaa
gaaggcgaggaactggacgcggcggcccaaggcaccgacgcatccagccagatccagccc
gagggctga
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