Pseudoxanthomonas spadix: DSC_08535
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Entry
DSC_08535 CDS
T01643
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psd
Pseudoxanthomonas spadix
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psd03400
]
DSC_08535
Enzymes [BR:
psd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DSC_08535
DNA repair and recombination proteins [BR:
psd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DSC_08535
Prokaryotic type
DSC_08535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AER56357
UniProt:
G7UV77
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All DBs
Position
1667063..1668478
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AA seq
471 aa
AA seq
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MPIALVWFRSDLRLADNPALHAALEAGFDPVPVYIHAPHEEGRWAPGAASNAWRHRSLKA
LDLALRQRGSRLLVRRGDSAMVLQQLIEQSRAQALFWNRKYEPATQPRDAAIKQALKQRH
VQVRSCNAALLAEPWDVQTRTGEPYKVFTAFYRNVMAGLAQRALQDAPEALPAVPSALKG
EGIDALGLAPALNWDAGFWEIWQAGEAGAHQALEVFVEGALRGYLDQRDLPDRIGTSRLS
PHLHFGEIAPWRVIARLQAQRGVSLDRDIDGFIRQLVWREFAHHLLHHFPHTAQQNLNPR
FDRFDWASTAPGPLQAWQHGRTGVPIVDAGMRELWQTGMMHNRVRMIVASYLTKHLRVHW
LEGARWFWQTLVDADLANNTLGWQWVAGTGADAAPYFRVFNPVTQARKFDPQARYITRWV
PELEALPVNARFAPWEFPQLCRGRACDYPHQPIVDLAQGRQAALAAYARTR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcgccctggtctggttccgcagcgatctgcgcctggccgacaatccggccctg
catgcggcgctggaagccggcttcgacccggtcccggtgtacatccatgccccgcacgag
gaaggccgctgggcgccgggtgcggcctccaatgcctggcggcatcgctcgctcaaggcg
ctggatctggccttgcgccagcgcggctcgcgcctgctggtccgccgcggcgacagcgcg
atggtcttgcagcagctgatcgaacaaagccgcgcgcaggcgctgttctggaaccgcaag
tacgaaccggccacccagccgcgcgatgcggcgatcaagcaggcgctcaagcagcggcac
gtccaggtgcgcagctgcaatgccgcgttgctggccgagccgtgggacgtgcagaccagg
accggcgagccgtacaaggtgttcactgcgttctatcgcaacgtcatggccgggctggcg
cagcgtgcgctgcaggacgcgcccgaagcgctgccggccgtgccgtcggcgctgaagggc
gagggcatcgatgcgctgggcctggcacctgcgttgaactgggatgcaggcttctgggag
atctggcaagccggcgaggccggcgcccaccaggcgctggaggtcttcgtcgagggcgca
ttgcgcggctacctggatcagcgcgacctgccggaccggatcggcacctcgcggctgtcg
ccgcacctgcacttcggcgagatcgcgccgtggcgggtgatcgcacggctgcaggcgcaa
cgcggcgtcagcctggaccgtgacatcgacggtttcatccggcagctggtgtggcgcgag
ttcgcccatcacctgctgcatcatttcccgcacacggcgcagcaaaacctcaacccgcgc
tttgaccggttcgactgggccagcaccgcaccaggcccgctgcaggcctggcagcacggc
aggaccggcgtgcccatcgtcgatgccggcatgcgcgagctgtggcagaccgggatgatg
cacaaccgcgtacgcatgatcgtggccagctacctcaccaagcacctgcgcgtgcactgg
ctggaaggggcgcgctggttctggcagacgctggtggatgcggacctggccaacaacacg
ctgggctggcagtgggtcgccggcaccggcgccgatgcggcgccgtatttccgcgtgttc
aacccggtgacccaggcgcgcaagttcgatccgcaggcgcgctacatcacccgctgggtg
cccgagctggaagcactgccggtgaatgcgcgcttcgcgccgtgggaatttccgcaattg
tgcaggggcagggcctgcgactatccgcaccagccgatcgtggacctggcccaaggccgc
caggccgcgctggccgcctatgccaggacccgctga
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