Pseudoxanthomonas spadix: DSC_09080
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Entry
DSC_09080 CDS
T01643
Name
(GenBank) lipid A ABC exporter
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DSC_09080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psd02000
]
DSC_09080
Enzymes [BR:
psd01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
DSC_09080
Transporters [BR:
psd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DSC_09080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_30
AAA_22
AAA_29
AAA_16
AAA_21
nSTAND1
AAA_23
RsgA_GTPase
DUF87
DUF3584
MMR_HSR1
NB-ARC
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AER56466
UniProt:
G7UWF9
LinkDB
All DBs
Position
complement(1786468..1788222)
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AA seq
584 aa
AA seq
DB search
MNAAFNGSAWKTYRRLLTFAKPYRGLLVLAALAALVEAAGSSLFLWLMKPITDETFVSKN
MEFAAWLPAAIIAVFLVRGIAGYLTDMSMGRAARSVARDLRVRVLGKYLRLPGSRFDAEP
VPSMLVRLGSDSDQVAQAAVDALKTMVQQSLQVIGALCIMLYISWQVTISVLVLAPPLAF
VMNKVAKRYRRVSHRIQESGAQLLQAADQTLSNQQEVKVYGAQPEELRRYATLADNNLRL
AMKVEATRGLSSALVQMMGAIGLAGLLLLAGHEAAAGRLTAGGFVSLMVSMIGIIPALKS
LTSVQNVLQRGVASAERLFSVLDAPDEMDTGLRPLARARGMIEFRDVSARYPGQAKPALE
HISFVARPGTVTAIVGRSGSGKSTLIKLIPRFYEPEGGQILVDGVPLQEYALADLRRQIA
LVGQQVMLFDGSVTANVAYGEMRSADPQALDKALRDAHAMEFIEQLPERKDTPIGVKGSR
LSGGQRQRLALARAMLKDAPILILDEATAALDNESERLVQDALTQLMPDRTTLVIAHRLS
TIEHADQVLVLDHGKLVEQGTHAELLARGGLYAQLHGAQFREAQ
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgcagccttcaacggctcggcctggaagacctaccgccggctgctgacctttgcc
aagccgtatcgtggcctgctggtgctggcggcgctggccgcgctggtcgaagccgccggt
agcagcctgttcctgtggctgatgaagccgatcaccgatgagaccttcgtctccaagaac
atggagtttgccgcctggctgccggcggccatcatcgcggtgttcctggtgcgcggcatc
gccggctacctgaccgacatgtcgatgggccgcgcggcgcgcagcgtggcgcgcgacctg
cgcgtgcgggtgctgggcaagtacctgcgcctgcccggttcgcgcttcgatgccgagccg
gtgccgtcgatgctggtgcgcctgggttcggattcggaccaggtcgcccaggccgcagtc
gatgcgctcaagaccatggtccagcagtcgctgcaggtcatcggcgcgctgtgcatcatg
ctctacatcagctggcaggtgaccatttcggtcctggtgctggcccccccgctggccttc
gtgatgaacaaggtcgccaagcgctaccgccgggtcagccaccgcatccaggaaagcggc
gcgcagctgctgcaggcggccgaccagaccctgtccaaccagcaggaagtgaaggtctac
ggcgcccagcccgaggaactgcggcgctacgccaccctggccgacaacaatctgcgcctg
gcgatgaaggtcgaagccacccgcggcctgtcttcggccctggtccagatgatgggcgcg
atcggcctggccggactgctgctgctggccgggcacgaagcggccgctggccgcctgacc
gccggcggcttcgtcagcctgatggtgtcgatgatcggcatcattcccgcgttgaagagt
ctcaccagcgtgcagaacgtcctgcagcgcggggtggcctcggccgagcgcctgttttcg
gtcctggacgcgccggacgagatggacaccgggttgcgcccgctggcacgcgccaggggg
atgatcgagttccgcgacgtcagcgcgcgctaccccggccaggccaaaccggcactggag
cacatcagctttgtcgcccggcccggcaccgtcaccgcgatcgtcgggcgttcgggcagc
ggcaaatccaccctgatcaagctgatcccgcgtttctatgagccggaaggcggccagatc
ctggtcgatggcgtgcccctgcaggagtacgcgctggcggacctgcgccggcagatcgcg
ctggtcggccagcaggtgatgctgttcgatggcagcgtcacggccaatgtggcctatggc
gagatgcgctcggccgatccgcaggcgctggacaaggcgctgcgcgatgcgcacgcgatg
gagttcatcgaacaattgccggagcgcaaggacaccccgatcggggtcaagggcagcagg
ctctccggcggccagcgtcagcgcctggccctggcccgggcgatgctcaaggacgcgccg
atcctgatcctggacgaagccaccgctgcgctggacaacgaatccgagcgcctggtccag
gatgcgctgacccagctgatgcccgaccgcaccaccctggtcatcgcccaccggctgtcc
accatcgaacacgccgaccaggtgctggtgctggatcacggcaagctggtcgagcagggc
acccacgccgagctgctggccaggggtgggctgtacgcgcagctgcatggtgcgcagttc
cgcgaagcgcaatga
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