Pseudoxanthomonas spadix: DSC_09105
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Entry
DSC_09105 CDS
T01643
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
psd
Pseudoxanthomonas spadix
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psd03016
]
DSC_09105
Enzymes [BR:
psd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
DSC_09105
Transfer RNA biogenesis [BR:
psd03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
DSC_09105
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GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
AER56471
UniProt:
G7UWG4
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All DBs
Position
complement(1792230..1792787)
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AA seq
185 aa
AA seq
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MHDDLFARSDAQLLSLFFALMPSASDQAALDEAARLHATRFGRMKPILAAKRHVTLLYLG
QPMDEQIPSLVAGAGRAMATIQGESFVLTLDQVAVFGRNSVVLAASQTPRALAELEQRVR
LAALLNRLLLARAPAFHPHLTLGHNDGRRVAPVNCPPVRLALDTVVLLRGAGDAPYQELG
RWSLA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgacctcttcgcccgctccgatgcgcagctgctgagcctgttcttcgccctg
atgccttccgcgagcgaccaggcggcgcttgacgaagccgcgcgcctgcatgccacgcgc
tttggccggatgaaacccatcttggcagccaagcgccatgtgaccttgctttacctgggc
cagccgatggacgagcagattccctcgctggtcgccggtgcggggcgggcgatggcgacg
atccagggcgagtccttcgtgctgacactggaccaggtggcggtgttcggccgtaattcg
gtggtgctggcagcctcgcagaccccacgcgcgctggccgagctggagcagcgcgtgcgc
cttgcggccctgctcaaccggctgctgctggccagggcgccggcgttccatccgcacctg
acccttggccacaacgacggtcgccgcgtcgcgccggtgaattgcccaccggtgcgtctg
gccttggacaccgtcgtcctgctgcgcggggcgggcgacgcgccttaccaggaactgggg
cgctggtcgctggcgtga
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