Pseudoxanthomonas spadix: DSC_09505
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Entry
DSC_09505 CDS
T01643
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DSC_09505 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psd01007
]
DSC_09505 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psd03016
]
DSC_09505 (lysS)
Enzymes [BR:
psd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
DSC_09505 (lysS)
Amino acid related enzymes [BR:
psd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DSC_09505 (lysS)
Transfer RNA biogenesis [BR:
psd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DSC_09505 (lysS)
Prokaryotic type
Other AARSs
DSC_09505 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AER56549
UniProt:
G7UN45
LinkDB
All DBs
Position
complement(1874659..1876167)
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AA seq
502 aa
AA seq
DB search
MNEPPPIDENSLIAERRGKLHALRGQGIAYPNDFRRHALAGDLQAEFADADTFTAGVLEG
LDRQVRLAGRLMAKRVMGKASFAQIQDQSGRIQLFLQGNVLGERYEAFKGWDVGDIVGVE
GTLTRTRTGELSVKATTLRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFI
KRSRIIRAIRAWLDARGFLEVETPMMHYIPGGATARPFTTHHNALGLDLYLRVAPELYLK
RLVVGGLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHEIMDLTENLIRDVAQSV
LGTTQVRWEGADIDLGQPFRRWRMDQAVRHHNPGITVADCTDRQALAGHCERLQIKVKPS
YGWGRLLLEIFEATVEHTLVEPTFITGYPLEVSPLARASDTEAGYTDRFELFINGKEIAN
GFSELNDPEDQAARFRAQVEAKEGGDDEAMHFDADYIRALEYGMSPTGGLGIGIDRLVML
LTGADSIRDVLLFPYMRPEAQG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaccgccgcccatcgacgaaaacagcctcatcgccgagcgccgcggcaaactt
cacgccctgcgcgggcagggcatcgcctatccgaacgacttccgtcgccacgcgctggcc
ggtgacctgcaggccgaattcgccgatgcggacaccttcactgccggggtgctcgaaggg
ctggaccgccaggtcaggctcgccggccggctgatggccaagcgggtgatgggcaaggcc
agcttcgcccagatccaggaccaatccgggcgcatccagctgttcctgcagggcaatgtg
ctgggcgagcgctatgaggcgttcaagggctgggacgtgggcgacatcgtcggcgtcgaa
ggcaccctgacccgcacccgcaccggcgagctgtcggtcaaggccaccacgttgcgcctg
ctgaccaagtcgctgcgtccgctgccggacaagtggcacggcctgagcgatgtggaacag
cgctaccgccagcgctacgtggacctgatcgtcaccccggaggcgcgcgaagtgttcatc
aagcgctccaggatcatccgcgcgatccgtgcctggctggacgcgcgcggcttcctggaa
gtggaaacgccgatgatgcattacatccccggcggggccacggccaggcccttcaccacc
catcacaacgcgctgggcctggacctgtacctgcgcgtggcaccggagctgtacctcaag
cgcctggtcgtgggcggcctggagcgcgtctacgagatcaaccgcaacttccgcaatgaa
ggggtcagcacccgccacaaccccgaattcaccatgctcgaactgtacgaggcctatgcc
acctaccacgagatcatggacctgaccgagaacctgatccgcgacgtggcccagtccgtg
ctgggcaccacccaggtgcgctgggagggcgccgacatcgacctgggccagccgttccgc
cgctggcgcatggaccaggccgtgcgccatcacaatccgggcatcaccgtggccgactgc
accgaccgccaggcgctggcgggccactgcgaacggctgcagatcaaggtcaaaccgtcc
tatggctggggcaggctgctgctggagatcttcgaggccacggtcgaacacaccctggtc
gagccgaccttcatcaccggctacccgctggaagtctcgccgctggcccgcgccagcgat
accgaggccggctacaccgaccgcttcgagctgttcatcaacggcaaggagatcgccaat
ggcttctccgagctcaacgacccggaagaccaggccgcgcgcttccgcgcccaggtcgag
gccaaggaaggtggcgacgacgaagccatgcacttcgacgccgattacatccgcgccctg
gagtacggcatgtcaccgaccggcggcctggggatcggcatcgaccggctggtgatgctg
ctgaccggggccgattcaatccgggatgtgctgctgttcccctacatgcgccccgaagcg
cagggttga
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