Pseudoxanthomonas spadix: DSC_10520
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Entry
DSC_10520 CDS
T01643
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DSC_10520 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psd03400
]
DSC_10520 (xseA)
Enzymes [BR:
psd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
DSC_10520 (xseA)
DNA repair and recombination proteins [BR:
psd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DSC_10520 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AER56748
UniProt:
G7UP54
LinkDB
All DBs
Position
2078772..2080115
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AA seq
447 aa
AA seq
DB search
MNDLPARDILTPSQLNILARDLLEGSFPAIWIEAELGNVTRPASGHLYFTLKDARAQVRC
AMFKPKSSWLKFVPREGLRVLARGRVTLYEARGEYQLVLDHMEEAGEGALRRAFEQLRAR
LAAEGLFAGERKRPLPAFPRRLALITSPSGAAVRDVISVLGRRFPLLEVEVLPTQVQGAT
AASQIAALVRAAGDSGRYEVVLVTRGGGSIEDLWAFNDEALVRAVAACAVPVVSAVGHET
DFTLCDFAADLRAPTPSAAAELLVPSQADLDMRVRGLGRRLYSLHAHRMDRVQQRVDRAW
LRLQAQSPQARLQLMRRRHADALRHLQAQWQAQLDRRRARLRHALSALGAHSPQRRLAAL
AERLAALQPRPQAAIARQLQRDSLRLRGLVRSLEAISPLATVARGYALITTADGTLVRST
AQVKVGDRLNARLADGQLGVRVETTPD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctgcccgcccgcgacatcctcaccccctcccagctcaacatcctggcccgc
gacctgctggaaggcagcttcccggcgatctggatcgaggccgaactgggcaacgtcacc
cgcccggcgtccgggcacctgtatttcaccctcaaggacgcccgcgcccaggtgcgctgc
gcgatgttcaagcccaagagcagctggctgaagttcgtcccgcgcgagggcctgcgcgtg
ctcgcccgcggccgggtgaccctgtacgaggcgcgcggcgagtaccagctggtgctggac
cacatggaagaggccggcgaaggcgcgctgcgtcgcgcattcgagcagctcagggcgcgg
ctggcggccgaaggcctgttcgccggcgaacgcaagcggccactgcccgcattcccgcgg
cggctggcgctgatcacctcgcccagcggcgcggcggtgcgcgatgtgatcagcgtgctg
ggccggcgctttccgctgctggaagtcgaggtgctgccgacccaggtgcagggcgccacc
gccgcgtcacagatcgctgcactggtgcgcgctgccggtgacagcggccgttacgaggtg
gtgctagtgacccgcggcggtggctccatcgaggacctgtgggccttcaacgacgaggcg
ctggtccgcgcggtggccgcctgcgcggtgccggtggtgtccgcggtgggccacgaaacc
gacttcaccctgtgcgatttcgccgccgacctgcgcgcgccgacgccctcggccgcggcc
gagctgctggtgccctcccaggccgatctggacatgcgcgtgcgcgggctgggccggcgt
ctgtacagcctgcacgcgcaccgcatggaccgggtgcagcagcgcgtggatcgcgcctgg
ctgcgcctgcaggcacaaagcccgcaggcgcgactgcagctgatgcgtcgccgccacgcc
gatgcactgcgccacctgcaggcgcagtggcaggcgcagctggatcgccgccgcgcgcgc
ctgcgccacgcgctgagcgcactgggcgcgcattcgccgcagcgccgcctggcggccctg
gccgaacgcctggccgccctgcagccgcgtccgcaggcggccatcgcccgccagctgcaa
cgcgacagcctgcgcctgcgcggcctggtgcgctcgctggaagcgatcagcccgctggcg
accgtggcccgcggctatgcgctgatcaccacggccgacggcacgctggtgcgttcgacc
gcccaggtgaaggtcggcgaccgcctgaacgcacgcctggccgacggccagctgggcgtg
cgggtggaaacgaccccggactga
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