Pseudoxanthomonas spadix: DSC_11135
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Entry
DSC_11135 CDS
T01643
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd00300
Lysine biosynthesis
psd01100
Metabolic pathways
psd01120
Microbial metabolism in diverse environments
psd01230
Biosynthesis of amino acids
Module
psd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DSC_11135
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psd01002
]
DSC_11135
Enzymes [BR:
psd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
DSC_11135
Peptidases and inhibitors [BR:
psd01002
]
Metallo peptidases
Family M20
DSC_11135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
AER56871
UniProt:
G7UPY7
LinkDB
All DBs
Position
complement(2212696..2213883)
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AA seq
395 aa
AA seq
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MKAASGSHDGDARAPADAAPTEPVLALACELIARPSVTPEDAGCQALIASRLQAAGFTCE
QLRFGRVDNLWATHGSGAPVLVLLGHTDVVPTGPVEAWTSDPFKPQVRQGNLYGRGSADM
KGSVAAFVVAAEQYVAAHPDHAGTLAVLLTSDEEGDAIDGVRRVARVLAERGQGIDWCIT
GEPSSTHTLGDLLRVGRRGSLTGTLTVKGVQGHVAYPHKARNPIHQAAPALAELTSRQWD
DGYESFPPTSLQVSNIHAGTGASNVIPGQLQVLFNLRYNPHWDAPRLEAEVAALLERHGL
EYALQWHRSGEPFYTPEGTLRCVARQVLGEFAGAPPQESTGGGTSDARFIAPLGAQCIEV
GPVNASIHQIDEHVRVADLERLPDLYRTLIERLLA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccgccagcggctcccacgacggcgacgcgcgcgcgcctgccgatgctgcgccc
accgagccggtcctggcgctggcctgcgagctgatcgcccggccttcggtcacacccgag
gacgccggctgccaggcgctgatcgcctcgcgcctgcaggcggctggcttcacctgcgag
caactgcgctttggccgggtcgacaacctgtgggccacgcacggcagcggcgcgccggtg
ctggtgctgctgggccataccgacgtggtgccgaccgggccggtcgaggcctggaccagt
gatccgttcaagccgcaggtgcgccagggcaacctctacggccgcggcagcgccgacatg
aagggcagcgtggctgcgttcgtggtcgctgccgagcaatacgtggctgcccatccggac
catgccggcaccctggcggtgctgctcaccagtgacgaggaaggcgatgccatcgatggc
gtgcgccgggtcgccagggtgttggccgagcgcgggcagggcatcgactggtgcatcacc
ggcgagccgtcttccacgcacacgctgggcgacctgctgcgtgtgggccgtcgcggcagc
ctgaccggcaccttgacggtcaagggcgtgcagggccacgtggcctatccgcacaaggcc
cgcaatccgatccaccaggccgcccccgccctggccgagctgacctcgcgccagtgggac
gacggctatgaaagcttcccgccgaccagcctgcaggtgtccaacatccatgccggcacc
ggcgccagcaacgtgatcccgggccagctgcaggtgctgttcaacctgcgctacaacccg
cactgggatgcgcccaggctggaggccgaagtcgccgcactgctggagcgccacggcctg
gagtacgcgctgcaatggcatcgcagcggcgagccgttctacacgcccgaaggcacgctg
cgctgcgtggcgcgtcaggtgctgggcgagtttgccggagcgccgccgcaggaaagcacc
ggcggcggcacctcggacgcgcgcttcatcgccccgctgggcgcgcagtgcatcgaggtc
gggccggtcaacgccagcatccaccagatcgacgagcacgtgcgcgtggccgacctggag
cggctgccggacctgtatcgcacgttgatcgaacggttgctggcgtaa
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