Pseudoxanthomonas spadix: DSC_11255
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Entry
DSC_11255 CDS
T01643
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
psd
Pseudoxanthomonas spadix
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psd03019
]
DSC_11255
03009 Ribosome biogenesis [BR:
psd03009
]
DSC_11255
Messenger RNA biogenesis [BR:
psd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DSC_11255
Ribosome biogenesis [BR:
psd03009
]
Prokaryotic type
rRNA processing factors
DSC_11255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Pox_A_type_inc
Motif
Other DBs
NCBI-ProteinID:
AER56895
UniProt:
G7UQ11
LinkDB
All DBs
Position
complement(2241223..2242719)
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AA seq
498 aa
AA seq
DB search
MSEEILVNVTPRETRVAVVENGMLQELHIERGWRRGIVGNIYKGQVQRVMPGMQAAFVEI
GHDRAAFLHASDIVRAGPPSNVAAGEEVPLPPAPIAPASILELVRDGQDVVVQVVKDPIG
SKGARLTTQISIPSRYLVLLPQSRVIGVSARIEDEAERARLRSLITELSSQHGSMGYIVR
TNAEGQPAEALAEDVAYLSRVWNVINRRAGEMAPRALLYEDLSLPLRAVRDLIRKDVEKV
KVDSRETYERLQAFVAKYMPPLAERIELYGGDRPIFDLYGVEDEIGRALDKQVPLKSGGY
LVIDQTEAMTTIDVNTGSFLGQRNLEETVYRTNLEAAQAVARQLRLRNLGGIIIIDFIDM
SDAEHKRQVLRTLEKGLARDHARTTVYDFSPLGLVEMTRKRTVESLERQLSEPCSACGGR
GMVKTAETVTYEIFREITRATRQFEAARLLVIASPQVVARITDEESQAVAELEEFLGKSI
RFQADGQYLQEQFDVVLL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggagatcctggtcaacgtcaccccgcgggagacccgggtggcggtggtggaa
aacggcatgctgcaggaactgcacatcgagcgcggctggcgccgcggcatcgtcggcaac
atctacaagggtcaggtgcagcgggtgatgcccgggatgcaggcggctttcgtggagatc
ggccatgaccgggccgccttcctgcacgccagcgacatcgtccgcgccgggccaccgtcg
aacgtggctgccggcgaggaagtgccgctgccgccggcacccatcgcgccggcgtccatt
ttggagctggtgcgcgacggccaggacgtggtggtgcaggtggtcaaggacccgatcggt
tccaagggcgcgcgcctgaccacccagatcagcattccctcgcgctatctggtgctgctg
ccgcagtccagggtgatcggggtgtcggcgcggatcgaggacgaggccgagcgcgcccgg
ctcaggagtctgatcaccgagctgtcttcgcagcacggcagcatgggctacatcgtgcgc
accaatgccgaaggccagccggccgaggcgctggccgaggacgtggcctatctgtcgcgg
gtgtggaacgtgatcaaccggcgcgccggcgagatggccccgcgcgcgctgctctacgag
gacctgagcctgccgctgcgcgcggtccgcgacctgatccgcaaggacgtggagaaggtc
aaggtcgattcgcgcgaaacctacgagcgcctgcaggccttcgtcgccaagtacatgccg
ccgctggccgagcgcatcgagctgtatggcggcgatcggccgatcttcgacctgtacggg
gtcgaggacgagatcggccgcgccctggacaagcaggtgccgctgaagtccggaggctac
ctggtgatcgaccagaccgaggcgatgaccacgatcgacgtcaacaccggttcgttcctg
ggccagcgcaacctggaggaaacggtctaccgcaccaacctggaagcggcgcaggcggtg
gcccggcagctgcggctgcgcaacctgggcgggatcatcatcatcgacttcatcgacatg
tccgatgccgagcacaagcgccaggtgctgcgcacgctggaaaagggcctggcgcgcgac
catgcccgcaccacggtctacgacttctcgccgctggggctggtcgagatgacccgcaag
cgcaccgtggaaagcctggaacgccagctgtccgagccctgcagcgcctgcggcgggcgg
ggcatggtcaagaccgccgagacggtgacctacgagatcttccgcgagatcacccgcgcc
acccgccagttcgaagccgcgcgcctgctggtgatcgcctcgccgcaggtggtggcgcgg
atcaccgacgaggagtcgcaggcggtggccgagctggaggagttcctgggcaagtcgatc
cgcttccaggccgatgggcagtacctgcaggaacagtttgatgtcgtgctgctttga
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