Pseudoxanthomonas spadix: DSC_11300
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Entry
DSC_11300 CDS
T01643
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd03030
DNA replication
psd03430
Mismatch repair
psd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSC_11300 (holA)
03430 Mismatch repair
DSC_11300 (holA)
03440 Homologous recombination
DSC_11300 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psd03032
]
DSC_11300 (holA)
03400 DNA repair and recombination proteins [BR:
psd03400
]
DSC_11300 (holA)
Enzymes [BR:
psd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSC_11300 (holA)
DNA replication proteins [BR:
psd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSC_11300 (holA)
DNA repair and recombination proteins [BR:
psd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSC_11300 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
AER56904
UniProt:
G7UQ20
LinkDB
All DBs
Position
complement(2252885..2253928)
Genome browser
AA seq
347 aa
AA seq
DB search
MELAPDRLAAQVADAALAPAYLIAGPEPLLVLEAADAVRARGRALGIAEREIFDLEGRDI
DWAGLQASFDAPSLFSARRIVEVRLPTGKPGKEGAEVISAFCARPPQDVVLLVTAGEWSK
AHRGKWADAIERIGVLSVAWAIKPHELSGWVQARLRARGLRAERDAIALLVERVEGNLLA
AAQEIDKLVLLADGRTLDLATMQSLVADAARFDVFGLIETTLSGHAGQAARMLAGLRAEG
EAVAGLMPMVVRNLLSTAHLARVAGQGGNSGSGLAAAMKGQGIWESRQAPFKRALQRHAS
PARWDRFVAEAGHIDRIAKGRAEGDAWVALERLLLAIADAKAVELLV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggaactggcccccgaccggctggccgcgcaggtcgccgatgcggcgctggcgccggcc
tacctgatcgccgggccggaaccgctgctggtgctggaggccgccgatgcggtccgcgcg
cgcgggcgcgcgctgggcatcgccgagcgcgaaatcttcgacctggagggccgcgacatc
gactgggccgggctgcaggccagcttcgatgcgcccagcctgttcagtgcccgccgcatc
gtcgaggtccgcctgcccaccggcaagccgggcaaggagggggccgaggtcatcagtgcc
ttctgcgcgcgcccgccgcaggacgtggtgctgctggtcaccgccggcgaatggagcaag
gcccatcgcggcaagtgggccgatgcgatcgagcgcatcggcgtgctctcggtggcctgg
gcgatcaagccgcacgaactctccggctgggtccaggcacgattgcgtgcgcgcggcctg
cgcgccgagcgcgatgcgatcgcgctgctggtcgagcgggtggaaggcaacctgctggcc
gccgcccaggaaatcgacaagctggtcctgctggccgatggccggaccctggacctggcg
acgatgcagtcgctggtggccgatgcggcgcgctttgacgtgttcggtctgatcgagacc
accctgtcgggccatgccggccaggccgcgcgcatgctcgccggactgcgcgccgaaggc
gaggcggtcgccgggctgatgccgatggtggtgcgcaacctgctcagcaccgcgcacctt
gcgcgcgtggccgggcagggcggcaactccggatccggtctggccgccgcgatgaagggg
cagggcatctgggaaagccggcaggcgccgttcaagcgcgcgctgcagcgccatgccagc
ccggcccgctgggaccgtttcgtcgccgaggccggacacatcgatcgcatcgccaagggc
cgcgccgaaggcgatgcctgggtcgccctggaacggctgctgctggcgatcgccgatgcc
aaggcggtggagctgctggtgtga
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