Pseudoxanthomonas spadix: DSC_11395
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Entry
DSC_11395 CDS
T01643
Name
(GenBank) ABC transporter permease/ATP-binding protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd02010
ABC transporters
psd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DSC_11395
03070 Bacterial secretion system
DSC_11395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psd02000
]
DSC_11395
02044 Secretion system [BR:
psd02044
]
DSC_11395
Transporters [BR:
psd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DSC_11395
Secretion system [BR:
psd02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
DSC_11395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_29
AAA_16
AAA_22
AAA_18
AAA_30
SbcC_Walker_B
DUF87
HUTI_composite_bact
MeaB
Zeta_toxin
NB-ARC
AAA_21
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AER56923
UniProt:
G7UQ39
LinkDB
All DBs
Position
complement(2276272..2278383)
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AA seq
703 aa
AA seq
DB search
MPEDLGLAGLVLLAQFHGIAADAGQLAHQHGRAGEPFDESVLLLAARQLGLKAGFLAIAA
DRLDKVALPALAWRRDGEHFIVAKLGEQKVLIQDLRLRRPKVLSRAEFEERYEGRLLLAA
SRASVLGELARFDFRWFVPAVVKYRRILLEVFVVSLFIQLFALVTPLFFQVVMDKVLVHH
GMTTLEVIAVGLVAIALFDVALNGLRTYVFAHTTSKIDVELGARLFRHILNLPLAYFESR
RVGETIARVRELENIRTFLTGQALTSVLDLLFTGVFLAVMFYYSGWLTLIVVLSLPVYAL
ISAGIIPILRKRLDEKFARGAENQSFLVETVSGIGTVKATAVDPRMARTWDNQLAGYVGA
SFRVTRLANIGQQSVQLVQKLVGVGILFFGARLVIDGKLSVGQLIAFNMLSGQVAAPIVR
LAQVWQDFQQVGISVERLGDILNTRTEVPGSRMALPPIQGRVTFDQLTFRYRPDTADVLS
GIDLDIAPGEVIGIVGRSGSGKSTLTKLVQRLYVPQGGRVLVDGHDLALADPAWLRRQLG
VVLQENFLFNRSIRENIALGDPGMPLERVIQAAQLAGAHEFILQLPEGYDTKVGDNGAGL
SGGQRQRIAIARALVTNPRILIFDEATSALDYESEHAVMQNMRAICQGRTVLIIAHRLST
VRMANRIVVVDKGRIVETGKHEELVDRPGGQYAHLYKLQQGIA
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgaagacctcggtctggccggattggtgctgttggcgcaattccatggcatcgcc
gccgacgccgggcaactggcgcatcagcacggccgggcgggcgaaccgttcgacgagagc
gtgttgcttctggccgccaggcaactcggcctgaaagccgggtttttggccatcgccgcc
gatcgcctggacaaggtcgcgttgcccgcgttggcgtggcggcgcgatggcgagcacttc
attgtcgccaagctgggcgagcagaaggtgttgatccaggaccttcgcctgcgccggccg
aaggtgctgtcgcgtgccgaattcgaagagcgctacgaggggcgcctgttgctggcagcg
tcgcgcgcatcggtgctgggggaactcgccaggttcgatttccgctggttcgttccagcg
gtggtgaagtaccgtcgcatcctgctggaagtcttcgtcgtctcactgttcatccagctg
ttcgcgctggtcacgccgctgttcttccaggtggtgatggacaaggtgctggtccaccac
ggcatgaccacgctggaggtcatcgcggtcggcctggtcgccatcgcgttgttcgacgtg
gccctcaacggcctgcgcacctacgtcttcgcccacaccaccagcaagatcgacgtggaa
ctgggcgcgcggctgttccgccacatcctcaacctgccgctggcctacttcgaatcgcgc
cgggtcggcgagaccattgcccgcgtccgcgaactggagaacatccgcacgttcctgacc
gggcaggcgctgacctcggtgctggacctgctgttcaccggggtgttcctggcggtgatg
ttctactacagcggctggctgaccctgatcgtggtgttgtcgctgccggtctatgcgctg
atctcggcgggcatcatcccgatcctgcgcaagcggctggacgagaagttcgcgcgcggc
gcggaaaaccagtccttcctggtcgagaccgtcagcggcatcggcacggtcaaggccacc
gcggtcgatccacgcatggcccgcacctgggacaaccagctggccggctatgtcggcgcc
agcttccgcgttacccggctggccaacatcggccagcaaagcgtgcaactggtgcagaag
ctggtcggcgtcggcatcctgttcttcggcgccaggctggtcatcgacggcaagctctcg
gttggccagttgattgcgttcaacatgctgtccgggcaggtggccgcgccgatcgtgcgc
ctggcccaggtgtggcaggacttccagcaggtcgggatctcggtcgagcggctgggcgac
atcctcaatacgcgcacggaagtgcccggcagccgcatggcgctgccgccgatccagggc
agggtcacgttcgaccagctcacgttccgctatcgccccgacacggccgacgtgctatcc
ggcatcgatctggatatcgccccgggcgaggtcatcggcatcgtcggccgctccggctcg
ggcaagagcaccctgaccaagctggtgcagcggctgtacgtgccgcagggcgggcgggtc
ctggtcgacggccacgacctggccttggccgacccggcctggctgcgccggcaactgggc
gtggtgctgcaggagaacttcctgttcaaccgcagcatccgcgagaacatcgcgctcggc
gaccccggcatgccgctggagcgggtgatccaggccgcgcagctggccggcgcccacgag
ttcatcctgcaactgcccgaaggctacgacaccaaggtcggcgacaacggcgccggcctg
tccggcgggcagcgccagcgcatcgccatcgcccgggcgctggtcaccaacccgcgcatc
ctgatcttcgacgaggccaccagcgcgctggactacgagtccgagcatgcagtgatgcag
aacatgcgcgccatctgccagggccgtacggtcctgatcatcgcccaccgcctgtccacg
gtgcgcatggcgaaccggatcgtcgttgtcgacaaggggcgcatcgtcgagaccggcaag
cacgaggaattggtcgaccggcccggcgggcagtacgcacacctctacaagctgcaacag
gggatcgcatga
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integrated database retrieval system
