Pseudoxanthomonas spadix: DSC_11550
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Entry
DSC_11550 CDS
T01643
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DSC_11550 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psd03400
]
DSC_11550 (recO)
DNA repair and recombination proteins [BR:
psd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DSC_11550 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DSC_11550 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AER56954
UniProt:
G7UQF1
LinkDB
All DBs
Position
complement(2308841..2309578)
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AA seq
245 aa
AA seq
DB search
MQPDDLTAFVLHTRPWRETSLLVEVLSDRHGRMGLIARGLQGSKRHVLRAALQPLQHIRL
VVQLRGELGRLVSAEALDAAPRLQGEAMLAAFYVNELMLRLVPRQDPLPDLYVGYAKVRA
RLAHGAALAWTLRRFERDLLDALGFGVGLDIDGDGEPIDPAARYRLDPEHGARRLLSERA
GERQCAPTGQALLALAHDTLPAPSDLADLRRAMRLLLAHHLGPRGLKSWEMLATLPRPPR
PGPPP
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgacgacctcaccgccttcgtcctgcacacccggccctggcgcgagaccagc
ctgctggtggaagtgctgagcgatcgccacggccgcatgggtctgatcgcgcgtggcttg
caggggtccaagcggcatgtgctgcgcgcggcgctgcagccgctgcagcacatccggctc
gttgtgcagctgcggggcgaactgggccggctggtgtcggccgaagcactggatgcggcg
ccgcgcctgcagggcgaggcgatgctggccgccttctacgtcaacgaactgatgctgcgg
ctggtcccgcgccaggacccgctgcccgacctgtatgtgggctatgccaaggtccgcgcg
cgcctggcccatggcgcggcgctggcctggacgttgcgccggttcgagcgcgacctgctc
gatgcgctgggtttcggcgtcggcctggacatcgacggcgatggcgagccgatcgacccg
gccgcacgctatcgcctggatcccgaacacggcgcgcgccgactgctgagcgaacgcgcc
ggcgagcgccagtgcgccccgaccgggcaggcgctgctggcgctggcccacgacaccttg
cccgcaccgtcggacctggccgacctgcgtcgggccatgcgcctgctgctggcccaccac
ctgggcccgcgcgggctcaaatcctgggaaatgctggccaccctgccgcgtccgccgcgc
cccggcccacccccttga
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integrated database retrieval system
