Pseudoxanthomonas spadix: DSC_12005
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Entry
DSC_12005 CDS
T01643
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd03030
DNA replication
psd03430
Mismatch repair
psd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSC_12005
03430 Mismatch repair
DSC_12005
03440 Homologous recombination
DSC_12005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psd03032
]
DSC_12005
03400 DNA repair and recombination proteins [BR:
psd03400
]
DSC_12005
Enzymes [BR:
psd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSC_12005
DNA replication proteins [BR:
psd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSC_12005
DNA repair and recombination proteins [BR:
psd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSC_12005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AER57045
UniProt:
G7UQX3
LinkDB
All DBs
Position
complement(2408560..2409309)
Genome browser
AA seq
249 aa
AA seq
DB search
MRQIILDTETTGLEWKKGNRVVEIGCVELIERRPSGRNFHRYLKPDCEFEAGAQEVTGLT
LEFLADKPGFEEVVEEFLAYIRGAEVIIHNAAFDVGFLDSELARLGDHYGRLADHCTVID
TLAMARVRFPGQRNSLDALCRRLGVDNTHRHLHGGLLDAQILADVYIALTSGQEEIGFGA
MEDNGSATGSVRHAFDASNLGLRARVLPTPGELEAHARRLEKLRSNSGGSCLWDLVETPP
APVEEAASA
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagatcatcctggacaccgaaaccaccggcctggagtggaagaagggcaaccgc
gtggtcgagatcggctgcgtggagctgatcgagcgccgtcccagcggccgcaacttccac
aggtacctcaagccggactgcgagttcgaggccggcgcgcaggaagtcaccggcctgacc
ctggagttcctggccgacaagccgggcttcgaggaggtggtggaggagttcctggcgtac
atccgcggcgccgaggtgatcatccacaacgcggccttcgacgtgggctttctggatagc
gagctggcgcgtcttggcgatcactatggccgcctggccgaccactgcacggtcatcgac
accctggccatggcgcgggtgcgcttccccggtcagcgcaattcgctcgacgcgctgtgc
aggcgcctgggcgtggacaacacccatcgccacctgcacggcggcctgctcgatgcgcag
atcctggccgatgtctatatcgccctgacctcgggccaggaagagatcggctttggcgcg
atggaagacaacggcagcgcgaccggcagcgtgcgccatgccttcgatgccagcaacctc
ggcctgcgcgcacgcgtgctgcccacgccgggcgagcttgaagcccacgccaggcgcctg
gaaaagctgcgttccaacagcggcggcagctgcctgtgggacctggtggagacgccgccg
gcgccggtggaagaagccgcgagcgcctga
DBGET
integrated database retrieval system
