Pseudoxanthomonas spadix: DSC_12040
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Entry
DSC_12040 CDS
T01643
Name
(GenBank) putative DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
psd
Pseudoxanthomonas spadix
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psd03032
]
DSC_12040
03036 Chromosome and associated proteins [BR:
psd03036
]
DSC_12040
03400 DNA repair and recombination proteins [BR:
psd03400
]
DSC_12040
DNA replication proteins [BR:
psd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DSC_12040
Chromosome and associated proteins [BR:
psd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DSC_12040
DNA repair and recombination proteins [BR:
psd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DSC_12040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AER57052
UniProt:
G7UQY0
LinkDB
All DBs
Position
complement(2415515..2415787)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKAELIEAVAGRSDLSKADSTRAVDAVIASITEALKGGDSVTIVGFGTFQVRGRAARTG
RNPKTGENIDIAASKNPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagccgaattgatcgaggccgttgccggccgttccgacctgagcaaggctgat
tccacccgcgccgtcgacgccgtcatcgccagcatcaccgaggccctcaagggcggtgac
tcggtcaccatcgtgggcttcggcaccttccaggtgcgcggccgcgctgcgcgtaccggc
cgcaacccgaaaaccggcgagaacatcgacatcgctgcctcgaagaatcctgcattcaag
gctggtaaagccctgaaggacgccgtaaactaa
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