Pseudoxanthomonas spadix: DSC_12410
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Entry
DSC_12410 CDS
T01643
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
psd
Pseudoxanthomonas spadix
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psd03016
]
DSC_12410
Enzymes [BR:
psd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
DSC_12410
Transfer RNA biogenesis [BR:
psd03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
DSC_12410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AER57126
UniProt:
G7URD4
LinkDB
All DBs
Position
2501967..2503310
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AA seq
447 aa
AA seq
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MNEYDSAKMADVLAASDGLELTDNPEEADVVLVNTCSIREKAQEKVFSQLGRWRVLKESR
LKGQGREVIIGVGGCVASQEGEAIIKRAPYVDLVFGPQTLHRLPELIRARREQNRPQVDI
SFPEIEKFDRLPEPRAEGPSAFVSIMEGCSKYCSFCVVPYTRGTEVSRPFEDVLVEVAQL
AAQGVREINLLGQNVNAYRGPIAPAEAADAEGEFADLGMLIRTIAQIQGVGRIRFTTSHP
LEFSDSLIDAYRDVPQLAHYLHLPVQSGSDRILSAMKRGYTALEFKSRIRKLRSVRPDIS
ISSDFIVGFPGETDADFDKTMKLIQDVGFDQSFSFIYSRRPGTPAADLPDHTPAAVKHAR
LERLQAHINAHAAGISQRMVGSVQTVLVEGPSRKNPDELTGKTENMRSVNFPGSKRMIGQ
FVDVLITQALTNSLRGRLAVAGDAPAA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagtacgactcggccaagatggccgacgtgctggccgccagcgacgggctggag
ctgaccgacaaccccgaagaggccgacgtggtcctggtcaatacctgctcgatccgcgag
aaggcacaggaaaaggtcttcagccagctcggccgctggcgcgtgctcaaggaaagcagg
ctcaagggccagggccgtgaggtgatcatcggcgtcggcggttgcgtggcttcgcaggaa
ggtgaggccatcatcaagcgcgccccgtatgtggacctggtgtttggcccgcagaccctg
caccggctgcccgagctgatccgcgcccggcgtgaacagaacaggccgcaggtggacatc
agcttcccggagatcgagaagttcgaccgcctgcccgaaccgcgtgccgaaggcccgtct
gcgttcgtgtcgatcatggaaggctgcagcaagtactgcagcttctgcgtggtgccctac
acccgcggcaccgaggtcagccggccgttcgaggacgtgctggtggaagtggcgcaactg
gctgcccagggtgtgcgcgagatcaacctgctcggccagaacgtcaacgcctatcgcggt
cccatcgcgccggccgaagctgcggatgcggaaggcgagttcgccgacctgggcatgctg
atccgcaccatcgcccagatccagggcgtgggccggatccgcttcaccacctcgcacccg
ctggaattttccgactcgctgatcgatgcctaccgcgacgtgccgcagctggcccactac
ctgcatctgccggtccagtccggcagcgaccgcatcctcagcgcgatgaagcgcggctac
accgcgctggagttcaagtccaggatccgcaagctgcgcagcgtccggccggacatctcg
atcagctcggacttcatcgtcggcttccccggcgagaccgatgcggactttgacaagacc
atgaagctgatccaggacgtgggctttgaccagagcttttccttcatctactcgcgccgc
ccgggcacgccggcggcagacctgcccgaccacacccccgccgcggtcaagcatgcccgc
ctggaacgcctgcaggcccacatcaacgcccatgccgccggcatctcgcagcggatggtc
ggcagcgtgcagaccgtgctggtcgaaggcccttcgcgcaagaatcccgacgagctgacc
ggcaagaccgagaacatgcgctcggtgaacttccccggatccaaacgcatgatcggtcag
ttcgtggacgtgctgatcacccaggccctgaccaactcgctgcgcggccggctggccgtg
gccggcgatgcgcccgccgcatga
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