Pseudoxanthomonas spadix: DSC_12495
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Entry
DSC_12495 CDS
T01643
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSC_12495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psd03000
]
DSC_12495
03400 DNA repair and recombination proteins [BR:
psd03400
]
DSC_12495
Enzymes [BR:
psd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DSC_12495
Transcription factors [BR:
psd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DSC_12495
DNA repair and recombination proteins [BR:
psd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSC_12495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AER57143
UniProt:
G7URF1
LinkDB
All DBs
Position
2520008..2521519
Genome browser
AA seq
503 aa
AA seq
DB search
MPAACLPDHRTCEQARLSRDARFDGLFFTAVSSTGIYCRPVCPASPAKAGNVTYYAAAAA
AEAAGFRPCLRCRPELAPDAGTWRRGDEVLARALKLIDTGLLAEQPLSALAGRLAVGERQ
LRRLFAQRLGTSPIGVHGTRRLLFAKQLLTETGLPITEVALAAGFGSLRRFNTVFKDSYR
MAPRQLRKAEPRQSAGDTLVLRLGYRPPYDFGAMLDFLRGRALPGVEHVDATSYARVVGP
AASPGWLRVSAWPGGEHALRLQLRNIAASGLLAVVQRLRRMFDLDADPRAIADALNDDPR
LRPLLGKRPGLRIPSGWDGFEIAIRAVIGQQVSVAAARTLTARLARAFGEPLAGPLHSQM
HTHLFPTPQALAEADLAAIGLTRARAATLRTVARAVLEGRVDFDAGTALDTFVERWTALP
GIGPWTAHYLALRGLGHPDAFPAEDLVLQRALANDGTRLRAGQLRQHAQAWRPWRGYAVL
HLWKDAMPAASSPSPTASREALP
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgcctgcctgcccgaccaccgcacctgcgaacaggcccgcctgagccgcgac
gcgcgcttcgacgggctgtttttcaccgcggtgtccagcaccggcatctactgccgcccg
gtctgcccggcgtccccagccaaagcgggcaacgtcacctactacgccgcagctgcggcc
gccgaagcggccggctttcgcccgtgcctgcgctgccggccggaactggcccccgacgct
ggcacctggcgtcgcggcgatgaggtgctcgcccgcgccctgaagctgatcgacaccggc
ctgctggccgagcagccgttgtccgcgctggccgggcgcctggcggtgggcgaacgccag
ctgcggcgcctgttcgcccagcgcctgggcacctcgccgatcggcgtgcatggcacccgc
cggctgctgttcgccaagcagctgctgaccgaaaccggcctgccgatcaccgaggtggcc
ctggccgccggattcggcagcctgcgtcgcttcaacacggtgttcaaggacagctaccgg
atggcgccgcgccagctgcgcaaggccgagccgcgccagagcgccggcgacaccctggtg
ctgcgcctgggctaccggccgccgtacgacttcggcgcgatgctcgacttcctgcgcggg
cgggcactgccgggcgtggagcatgtcgatgcgacctcctatgcccgcgtggtcggcccg
gctgcctcgcccggctggctgcgggtcagcgcctggcccggcggcgaacatgcgctgcgc
cttcagctgcgcaacatcgccgcgagcgggctgctggccgtggtccagcgcctgcgccgg
atgttcgacctggatgccgacccacgcgccatcgccgacgcgctgaatgacgatccgcgc
ctgcgcccgctgctgggcaagcggcctggcctgcgcattcccagcggctgggacggcttt
gaaatcgcgatccgcgcggtgatcggccagcaggtcagcgtggccgccgcgcgcacgctc
accgcgcgcctggcccgggccttcggcgaaccgctcgccggcccgctgcacagccagatg
cacacccatctgttccccaccccgcaggcgctggccgaggccgacctggccgcgatcggc
ctgaccagggcgcgcgcggccacgctgcgcacggtggcccgggcggtgctggagggacgg
gtcgatttcgatgccggcactgccctggacaccttcgtcgagcgctggaccgccctgccc
ggcatcggcccctggaccgcccactacctggcgctgcgcgggctcggtcatcccgatgcc
tttcccgccgaagacctggtgttgcaaagagcgctggccaacgacggcacgcgcctgcgc
gccggccagctgcggcagcacgcgcaggcctggcgtccctggcgcggctacgccgtgctg
catctgtggaaggacgccatgccggccgcctcatccccatcgcccaccgcctccagggag
gccttgccatga
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integrated database retrieval system
