Pseudoxanthomonas spadix: DSC_14930
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Entry
DSC_14930 CDS
T01643
Name
(GenBank) transcriptional regulator catR
KO
K21757
LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
Organism
psd
Pseudoxanthomonas spadix
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psd03000
]
DSC_14930
Transcription factors [BR:
psd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DSC_14930
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AER57630
UniProt:
G7UVG9
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All DBs
Position
3054775..3055704
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AA seq
309 aa
AA seq
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MDLRQLRYFVAVARERNFTRAAEQLHIAQPPLSRQIQQMEQELGVQLLVRSSRPIRLTDA
GRLFYEEAQQVLGRVEQMKDAARRIGHGQRRVISIGFVASTLYAGLPTVVRRLRQARPDA
DVRLVEMMSGPQVEGLKNGRIDVGFGRMRSSDPSVERQVLREERLVVAIPPAFALAAEDA
PLKPAALKGQKLVVYPSEPRPSFADQMLSLLGHHGVRPPQLQEVRDLQTALGLVAAETGV
CLIPASARFLRSDLRYRLIDDQEATSPVVMSYRRNEDPALIALLRQLICEMYAENPPWLD
IPHNRLTTP
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcgccagctcaggtacttcgtcgccgtcgcgcgcgagcgcaatttcacccgt
gccgccgagcagctgcacatcgcccaaccgccactgagccggcagatccagcagatggag
caagaacttggcgtacagctgctggtgcgcagcagccggccgatccggcttaccgacgcc
gggcgcctgttctatgaggaggcccagcaggtgctcggacgcgtggagcagatgaaggac
gccgcacgccgcatcggccatggccagcggcgggtgatcagcatcggcttcgttgcctcc
accctgtacgcgggcctgcccaccgtggtgcgccggctgcgccaggcgcggcccgatgcc
gacgtgcgtctggtggagatgatgtccggcccccaggtcgaaggcctcaagaacggccgc
atcgacgtcggctttggccgcatgcgcagcagcgatcccagcgtggagcgccaggtgctg
cgcgaggaacgcctggtggtggcgatcccgccggcctttgcgctggccgccgaggatgcg
ccgctgaagccagcggcgctgaagggccagaagctggtggtctatcccagtgagccgcgg
ccgagcttcgccgaccagatgctctcgctgctggggcaccatggcgtacgcccgccgcag
ctacaggaggtgcgtgacctgcagacggcgctgggcctggtcgcggccgaaaccggcgtg
tgcctgatcccggcttcggcccggttcctgcgctcggacctgcgctaccggctgatcgat
gaccaggaggccacctcgccggtggtcatgagctaccgccgcaacgaggacccggcgctg
atcgccctgctccggcagctgatctgcgagatgtacgcggaaaacccgccgtggctggac
atcccccacaatcgcctgaccacgccgtag
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