Pseudomonas sp. SD17-1: N0B28_03810
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Entry
N0B28_03810 CDS
T11807
Name
(GenBank) PLP-dependent aspartate aminotransferase family protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
psdd Pseudomonas sp. SD17-1
Pathway
psdd00260
Glycine, serine and threonine metabolism
psdd00270
Cysteine and methionine metabolism
psdd00450
Selenocompound metabolism
psdd00670
One carbon pool by folate
psdd01100
Metabolic pathways
psdd01110
Biosynthesis of secondary metabolites
psdd01230
Biosynthesis of amino acids
Module
psdd_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
psdd00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
N0B28_03810
00270 Cysteine and methionine metabolism
N0B28_03810
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
N0B28_03810
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
N0B28_03810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psdd04147
]
N0B28_03810
Enzymes [BR:
psdd01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
N0B28_03810
Exosome [BR:
psdd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
N0B28_03810
SSDB
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Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Aminotran_1_2
DUF2378
Motif
Other DBs
NCBI-ProteinID:
WEJ22424
LinkDB
All DBs
Position
complement(850103..851269)
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AA seq
388 aa
AA seq
DB search
MTQHDKTAFATRVIHAGQSPDPSTGALMPPIYANSTYIQQSPGVHKGLDYGRSHNPTRWA
LERCVADLEGGPQAFAFASGLAAISAVLELLDAGSHIVSGNDLYGGTFRLFERVRRRSAG
HRFSFVDLSDLAAFEAALQDDTRMVCIETPSNPLLRLSDLAAIARLCRARGILCVADNTF
ASPWIQRPLELGFDIVVHSSTKYLNGHSDVIGGIAVVGDNAELAERLGFIQNAVGAIAGP
FDAFLTLRGVKTLALRMERHCSNALALAQWLEQQPQVARVYYPGLPSHPQHALARQQMHG
FGGMISLDLATDLAGARRFLEQVQIFALAESLGGVESLIEHPAIMTHATIPEQTRAQLGI
GDALVRLSVGVEDLDDLRADLAQALARI
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcacgacaagaccgccttcgccacccgcgtgatccatgcagggcaatcgccc
gacccgtccaccggcgcgctgatgccgccgatctatgccaactccacctacatccagcag
agccccggcgtgcacaagggcctggactacgggcgctcgcacaaccccacgcgctgggca
ctggaacgctgcgtggccgatctggagggcggcccccaggcgttcgccttcgcctccggg
ctggcggcgatctcggcggtgctcgaactgctggatgccggctcccacatcgtttcgggc
aatgacctgtacggcggcaccttccgcctgttcgaacgggtgcgtcggcgcagcgccggg
caccgcttcagcttcgtcgacctgtccgaccttgccgcgttcgaggcagcgttgcaggac
gacacgcgcatggtgtgcatcgaaaccccgagcaacccgctgctgcgcctgagcgacctg
gcggccatcgcacgcctctgccgcgcacgcggcatcctctgcgtggccgacaacaccttt
gccagcccatggatccagcgcccgctggaactgggtttcgacatcgtggtgcactcgagc
accaagtacctcaacgggcattcggacgtgatcggcggcattgccgtggtgggtgacaac
gccgagctggccgagcgcctgggcttcatacagaacgcggtgggcgccatcgccggcccg
ttcgatgccttcctcaccttgcgcggggtcaagaccctggccctgcgcatggagcgccac
tgcagcaatgccctggcactggcgcagtggctcgaacagcaaccgcaggtggcgcgtgtg
tactaccccggcttgccctcgcacccgcagcacgccctggcgcgccagcagatgcacggt
tttggcgggatgatctcgctcgacctggctaccgacctggccggtgcccgacgcttcctg
gagcaggtacagatctttgccttggccgaaagcctgggcggtgtggaaagcctgatcgag
cacccggcgatcatgacccatgccaccatccccgagcagacgcgcgcgcaactgggcatt
ggcgacgctctggtgcgcctgtcggtaggcgtggaagacctcgatgacctgcgcgcagac
ctggcccaggcactcgcacgtatctga
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