Pseudomonas sp. SD17-1: N0B28_04940
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Entry
N0B28_04940 CDS
T11807
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
psdd Pseudomonas sp. SD17-1
Pathway
psdd00330
Arginine and proline metabolism
psdd00480
Glutathione metabolism
psdd01100
Metabolic pathways
psdd01110
Biosynthesis of secondary metabolites
psdd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
psdd00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
N0B28_04940
09106 Metabolism of other amino acids
00480 Glutathione metabolism
N0B28_04940
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
N0B28_04940
Enzymes [BR:
psdd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
N0B28_04940
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
DUF7230
Motif
Other DBs
NCBI-ProteinID:
WEJ22632
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All DBs
Position
complement(1111252..1112415)
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AA seq
387 aa
AA seq
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MSIQVEDYFARDTFNKMKAFADKQETPFVLIDTAMISKAYDDLRAGFEFAKVYYAVKANP
AVEIIDLLKDKGSNFDIASIYELDKVMARGIGPERISYGNTIKKSKDIRYFYEKGVRLYA
TDSEADLRNIAKAAPGSKVYVRILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVP
YGISFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLE
TYAEEIIRFLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVG
KFSGLIETMDESIKFPIWTEKKGEMEEVVIAGPTCDSADIMYEHYKYGLPLNLAIGDRLY
WLSTGAYTTSYSAVEFNGFPPLKAYYL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatccaggtcgaagactacttcgcacgcgataccttcaacaaaatgaaggcgttc
gccgacaagcaagaaaccccgttcgtgctcatcgacacggccatgatcagcaaggcctat
gacgacctgcgcgccggtttcgaattcgccaaggtgtactacgcggtcaaggccaaccct
gcggtcgaaatcatcgacctgctcaaggacaagggctcgaacttcgacatcgcctcgatc
tacgagctggacaaggtgatggcccgcggcatcggcccggagcgcatcagctacggcaac
accatcaagaaatccaaggacatccgctacttctacgagaagggcgtgcgcctgtacgcc
accgactccgaagccgacctgcgcaatatcgccaaggccgcaccgggctcgaaagtgtat
gtacgcatccttaccgaaggctccaccaccgccgactggccgctgtcgcgcaagttcggc
tgccagaccgacatggccatggacctgctgatcctggcccgcgacctgggcctggtgcct
tacggcatctccttccacgtgggttcgcagcagcgcgacatcagcgtgtgggatgcggcc
atcgccaaggtcaaggtgatcttcgagcgcctgaaggaagaagacggcatcgtgctcaag
ctgatcaacatgggtggcggctttccggccaactacatcacccgtaccaacagcctggaa
acctacgccgaagagatcattcgctttctcaaggaagacttcggcgacgacctgccggaa
atcatcctggagcctggccgctcgctgattgccaacgccggcatcctggtcagcgaagtg
gtgctggtggcgcgcaagtcgcgtaccgccgtggagcgctgggtatacaccgacgtgggc
aaattctccggcctgatcgaaaccatggacgagtcgatcaagttcccgatctggaccgag
aagaaaggcgagatggaagaggtggtgatcgccggcccgacctgcgacagcgccgacatc
atgtacgaacactacaagtacggcctgccgctgaacctggccatcggtgaccgcctgtac
tggctgtcgaccggcgcctacaccaccagctacagcgcggtggagttcaacggcttcccg
ccgctgaaggcgtactacctgtaa
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