KEGG   Pseudomonas sp. SD17-1: N0B28_08845
Entry
N0B28_08845       CDS       T11807                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
psdd  Pseudomonas sp. SD17-1
Pathway
psdd00010  Glycolysis / Gluconeogenesis
psdd00020  Citrate cycle (TCA cycle)
psdd00260  Glycine, serine and threonine metabolism
psdd00280  Valine, leucine and isoleucine degradation
psdd00310  Lysine degradation
psdd00380  Tryptophan metabolism
psdd00620  Pyruvate metabolism
psdd00630  Glyoxylate and dicarboxylate metabolism
psdd00640  Propanoate metabolism
psdd00670  One carbon pool by folate
psdd00785  Lipoic acid metabolism
psdd01100  Metabolic pathways
psdd01110  Biosynthesis of secondary metabolites
psdd01120  Microbial metabolism in diverse environments
psdd01200  Carbon metabolism
psdd01210  2-Oxocarboxylic acid metabolism
psdd01240  Biosynthesis of cofactors
Module
psdd_M00009  Citrate cycle (TCA cycle, Krebs cycle)
psdd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psdd_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
psdd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
psdd_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:psdd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    N0B28_08845 (lpdA)
   00020 Citrate cycle (TCA cycle)
    N0B28_08845 (lpdA)
   00620 Pyruvate metabolism
    N0B28_08845 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    N0B28_08845 (lpdA)
   00640 Propanoate metabolism
    N0B28_08845 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    N0B28_08845 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    N0B28_08845 (lpdA)
   00310 Lysine degradation
    N0B28_08845 (lpdA)
   00380 Tryptophan metabolism
    N0B28_08845 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    N0B28_08845 (lpdA)
   00670 One carbon pool by folate
    N0B28_08845 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psdd04147]
    N0B28_08845 (lpdA)
Enzymes [BR:psdd01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     N0B28_08845 (lpdA)
Exosome [BR:psdd04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   N0B28_08845 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored HI0933_like GIDA FAD_binding_3 NAD_binding_8 Thi4 AlaDh_PNT_C Amino_oxidase DAO 3HCDH_N Lys_Orn_oxgnase Spike_JR1 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: WEJ23366
LinkDB
Position
1978254..1979690
AA seq 478 aa
MTQKFDVVVIGAGPGGYVAAIKAAQLGLSTACIEKYVDGEGKLALGGTCLNVGCIPSKAL
LDSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQG
HGKLLAGKKVEVTKPDGSTEIIEAENVILASGSRPIDIPPAPVDQKVIVDSTGALEFQTV
PKRLGVIGAGVIGLELGSVWSRLGAQVTVLEALDTFLMAADTAVAKEGLKTLTKQGLDIK
LGARVTGSKVNGDEVEVTYTDANGEQKITFDRLIVAVGRRPVTTDLLAADSGVTIDERGF
VFVDDYCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTH
PEMAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIAMEFGSSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgacccagaaattcgacgtggtagtgattggtgcaggtcctggcggctatgtagccgcg
atcaaggctgcccagctcggcctgagcactgcctgtatcgagaagtacgttgacggcgaa
ggcaaactggccctcggcggtacctgcctgaacgtgggttgcattccgtccaaggcgctg
ctggacagctcctggaagtacaaggaagccaaagagagcttcaacgtgcacggcatctcc
actggcgaagtgaagatggacgtggctgcgatggttggccgcaaggctggcatcgtcaag
aacctgaccggcggcgttgccaccctgttcaaggccaacggcgtcacttcgatccagggc
cacggcaaactgctggccggcaagaaagtcgaagtcaccaagcctgacggcagcaccgaa
atcatcgaagccgagaacgtgatcctggcctccggttcgcgtccgatcgacattccgccg
gctccggtcgaccagaaagtcatcgtcgactccaccggcgccctggaattccagaccgtg
ccaaaacgcctgggcgtgatcggcgccggcgtcatcggcctggagctgggttcggtatgg
tcgcgcctgggtgcccaggtgaccgtgctcgaagccctggacaccttcctgatggcagcc
gacaccgctgttgccaaggaaggcctgaagaccctgaccaagcaaggtctggacatcaag
ctgggcgctcgcgtgaccggctcgaaggtcaacggcgacgaagtcgaagtgacctacacc
gacgccaacggcgagcagaagatcaccttcgacaggctgatcgttgcagtcggccgtcgc
cctgtgaccaccgacctgctggctgccgacagcggcgtgaccatcgacgagcgcggtttc
gtgttcgttgacgactactgcgctaccagcgtaccgggcgtctacgccatcggtgacgtg
gtacgtggcatgatgctggcgcacaaggcctcggaagagggcatcatggtcgtcgagcgc
atcaagggccacaaggcccagatgaactacgacctgatcccatcggttatctacacccac
ccggaaatggcctgggtcggtaaaaccgagcaagccttgaaggctgaaggcgttgaggtt
aacgtgggcaccttcccgttcgcggccagcggccgtgcgatggcggccaacgacaccggt
ggtttcgtcaaggtcatcgccgatgccaagaccgaccgcgttctgggtgtacacgtcatt
ggcccaagcgctgccgaactggtgcagcagggtgcaatcgcaatggaattcggctccagc
gccgaagacctgggcatgatggtcttctcccatccgaccttgtctgaagcgctgcacgaa
gccgctctggccgtgaatggcggtgccatccacgtagccaaccgcaagaagcgttaa

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