Pseudomonas sp. SD17-1: N0B28_08845
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Entry
N0B28_08845 CDS
T11807
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
psdd Pseudomonas sp. SD17-1
Pathway
psdd00010
Glycolysis / Gluconeogenesis
psdd00020
Citrate cycle (TCA cycle)
psdd00260
Glycine, serine and threonine metabolism
psdd00280
Valine, leucine and isoleucine degradation
psdd00310
Lysine degradation
psdd00380
Tryptophan metabolism
psdd00620
Pyruvate metabolism
psdd00630
Glyoxylate and dicarboxylate metabolism
psdd00640
Propanoate metabolism
psdd00670
One carbon pool by folate
psdd00785
Lipoic acid metabolism
psdd01100
Metabolic pathways
psdd01110
Biosynthesis of secondary metabolites
psdd01120
Microbial metabolism in diverse environments
psdd01200
Carbon metabolism
psdd01210
2-Oxocarboxylic acid metabolism
psdd01240
Biosynthesis of cofactors
Module
psdd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psdd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psdd_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
psdd_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
psdd_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
psdd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
N0B28_08845 (lpdA)
00020 Citrate cycle (TCA cycle)
N0B28_08845 (lpdA)
00620 Pyruvate metabolism
N0B28_08845 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
N0B28_08845 (lpdA)
00640 Propanoate metabolism
N0B28_08845 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
N0B28_08845 (lpdA)
00280 Valine, leucine and isoleucine degradation
N0B28_08845 (lpdA)
00310 Lysine degradation
N0B28_08845 (lpdA)
00380 Tryptophan metabolism
N0B28_08845 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
N0B28_08845 (lpdA)
00670 One carbon pool by folate
N0B28_08845 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psdd04147
]
N0B28_08845 (lpdA)
Enzymes [BR:
psdd01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
N0B28_08845 (lpdA)
Exosome [BR:
psdd04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
N0B28_08845 (lpdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_oxidored
HI0933_like
GIDA
FAD_binding_3
NAD_binding_8
Thi4
AlaDh_PNT_C
Amino_oxidase
DAO
3HCDH_N
Lys_Orn_oxgnase
Spike_JR1
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
WEJ23366
LinkDB
All DBs
Position
1978254..1979690
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AA seq
478 aa
AA seq
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MTQKFDVVVIGAGPGGYVAAIKAAQLGLSTACIEKYVDGEGKLALGGTCLNVGCIPSKAL
LDSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQG
HGKLLAGKKVEVTKPDGSTEIIEAENVILASGSRPIDIPPAPVDQKVIVDSTGALEFQTV
PKRLGVIGAGVIGLELGSVWSRLGAQVTVLEALDTFLMAADTAVAKEGLKTLTKQGLDIK
LGARVTGSKVNGDEVEVTYTDANGEQKITFDRLIVAVGRRPVTTDLLAADSGVTIDERGF
VFVDDYCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTH
PEMAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIAMEFGSSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKKR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaaattcgacgtggtagtgattggtgcaggtcctggcggctatgtagccgcg
atcaaggctgcccagctcggcctgagcactgcctgtatcgagaagtacgttgacggcgaa
ggcaaactggccctcggcggtacctgcctgaacgtgggttgcattccgtccaaggcgctg
ctggacagctcctggaagtacaaggaagccaaagagagcttcaacgtgcacggcatctcc
actggcgaagtgaagatggacgtggctgcgatggttggccgcaaggctggcatcgtcaag
aacctgaccggcggcgttgccaccctgttcaaggccaacggcgtcacttcgatccagggc
cacggcaaactgctggccggcaagaaagtcgaagtcaccaagcctgacggcagcaccgaa
atcatcgaagccgagaacgtgatcctggcctccggttcgcgtccgatcgacattccgccg
gctccggtcgaccagaaagtcatcgtcgactccaccggcgccctggaattccagaccgtg
ccaaaacgcctgggcgtgatcggcgccggcgtcatcggcctggagctgggttcggtatgg
tcgcgcctgggtgcccaggtgaccgtgctcgaagccctggacaccttcctgatggcagcc
gacaccgctgttgccaaggaaggcctgaagaccctgaccaagcaaggtctggacatcaag
ctgggcgctcgcgtgaccggctcgaaggtcaacggcgacgaagtcgaagtgacctacacc
gacgccaacggcgagcagaagatcaccttcgacaggctgatcgttgcagtcggccgtcgc
cctgtgaccaccgacctgctggctgccgacagcggcgtgaccatcgacgagcgcggtttc
gtgttcgttgacgactactgcgctaccagcgtaccgggcgtctacgccatcggtgacgtg
gtacgtggcatgatgctggcgcacaaggcctcggaagagggcatcatggtcgtcgagcgc
atcaagggccacaaggcccagatgaactacgacctgatcccatcggttatctacacccac
ccggaaatggcctgggtcggtaaaaccgagcaagccttgaaggctgaaggcgttgaggtt
aacgtgggcaccttcccgttcgcggccagcggccgtgcgatggcggccaacgacaccggt
ggtttcgtcaaggtcatcgccgatgccaagaccgaccgcgttctgggtgtacacgtcatt
ggcccaagcgctgccgaactggtgcagcagggtgcaatcgcaatggaattcggctccagc
gccgaagacctgggcatgatggtcttctcccatccgaccttgtctgaagcgctgcacgaa
gccgctctggccgtgaatggcggtgccatccacgtagccaaccgcaagaagcgttaa
DBGET
integrated database retrieval system