Pseudomonas sp. SD17-1: N0B28_16350
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Entry
N0B28_16350 CDS
T11807
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
psdd Pseudomonas sp. SD17-1
Pathway
psdd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psdd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
N0B28_16350 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psdd01007
]
N0B28_16350 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psdd03016
]
N0B28_16350 (serS)
Enzymes [BR:
psdd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
N0B28_16350 (serS)
Amino acid related enzymes [BR:
psdd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
N0B28_16350 (serS)
Transfer RNA biogenesis [BR:
psdd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
N0B28_16350 (serS)
Prokaryotic type
N0B28_16350 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CEP162_C
Filament
TerB_C
OapC
DUF8221
Motif
Other DBs
NCBI-ProteinID:
WEJ19859
LinkDB
All DBs
Position
complement(3602142..3603422)
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AA seq
426 aa
AA seq
DB search
MLDSQLLRGQLQEVADRLASRGFSLDVARIEALEERRKSVQTRTEQLQAERNARSKSIGQ
AKAKGEDIAPLMADVERMANELAAGKVELEGIREELDAILLTIPNLPDASVPVGADEDDN
VEVRRWGTPRSFDFAIQDHVALGERNGYLDFETAAKLSGARFALLRGPIARLHRALAQFM
INLHTAEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADFYLIPTAEVSLTN
IVAGEIVDAKQLPIKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPGKSMEA
LEGLTANAERVLQLLELPYRVLSLCTGDMGFSAVKTYDLEVWVPSQDKYREISSCSNCGD
FQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPYMG
GLEIIG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctcgattcccaactgttacgcggccaacttcaggaagtggcggatcgcctggcttcc
cgtggcttcagcctggatgtcgcgcgcatcgaagcacttgaagagcgccgcaagtctgtg
cagacccgcaccgaacagctgcaggccgagcgtaacgcccgttccaaatccatcggccag
gccaaggccaagggtgaggacattgccccgctgatggccgacgtcgagcgcatggccaac
gaactggctgccggcaaggtggagctggaaggtatccgcgaagagctggacgctatcctg
ctgaccatccccaacctgccggacgccagcgtaccggtgggcgccgatgaagacgacaac
gtcgaagtgcgccgctggggcaccccgcgcagcttcgattttgcgatccaggaccacgtc
gccctgggcgagcgcaacggctacctcgacttcgagaccgcagccaagctgtcgggcgcg
cggtttgccctgctgcgcggcccgatcgcccgtctgcaccgtgccctggcgcagttcatg
atcaacctgcacaccgccgagcatggctacgaggaagcctacaccccgtacctggtgcag
gccccggcgctgcagggtaccggccagctgcccaagttcgaggaagacctgttcaagatc
agccgcgaaggcgaggccgacttctacctgatcccgacggccgaagtgtcgctgaccaac
atcgtggccggcgaaatcgtcgatgccaagcaactgccgatcaagttcgtcgcccacacc
ccgtgctttcgtagcgaagccggtgcgtcgggtcgcgatacccgcggcatgatccgccag
caccagttcgacaaggtcgagatggtccaggtggtcgagccgggcaagtcgatggaagcc
ctcgaaggcctgactgccaacgccgagcgcgtgctgcagctgctggagctgccttaccgc
gtactgtcgctgtgcaccggcgacatgggcttcagtgccgtgaagacctacgacctggaa
gtgtgggtgccgagccaggacaagtaccgcgaaatttcctcgtgctccaactgcggcgac
ttccaggcgcgccgcatgcaggcccgctggcgcaacccggaaaccggcaagccggagctg
gtgcacaccctcaacggctcgggcctggctgtaggccgtaccctggtggcagtgctggag
aactaccagcaggctgatggcagcatccgtgtaccggaagtgctcaagccttacatgggt
ggcctggagatcatcggttaa
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