Pseudomonas sp. SD17-1: N0B28_20530
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Entry
N0B28_20530 CDS
T11807
Name
(GenBank) carbohydrate porin
KO
K07267
porin
Organism
psdd Pseudomonas sp. SD17-1
Brite
KEGG Orthology (KO) [BR:
psdd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psdd02000
]
N0B28_20530
Transporters [BR:
psdd02000
]
Other transporters
Pores ion channels [TC:
1
]
N0B28_20530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
WEJ20630
LinkDB
All DBs
Position
4510440..4511792
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AA seq
450 aa
AA seq
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MHQFHHLPPAAATLLAGLAASTLACSLQAAPLLDGDSPWMLGDWGGTRSALAERGYDFTL
GYTGEMGSNLHGGHDHSNTARYSDQFSLGSHLDLQKILGWQGAEFQLTVTERHGNNISND
RINDPRVGGFTSAQEVWGRGQTWRLTQMWFKQTYLDGDLDVKVGRFGQGEDFNSFPCDFQ
NLAFCGSQVGNWAGSIWYNWPVSQWALRVKYHLTPELYAQVGAYEQNPSNLERQNGFKLS
GSGTQGAVLPVELVWTPAIDGLKGEYRAGYYYSSPKAQDVYKDGNGQPAALSGQDYRSSS
SKHGFWLGAQQQVTSLASDHSRGLSVFANATLHDKKTNAIDNYVQAGVVYKGLFDARAKD
DIGFALARVHVNPAYRRNAEARNRANALFDYDNPAFLPVQDTEYSAELYYGIHLAQWLTV
RPNLQYIRHPGGVGHVDDALIGGLKIQSSF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagttccatcatctgccccccgccgccgcgaccttgctggcaggcctggccgcc
agcaccctggcctgcagcctgcaggccgcccccctcttggacggcgactcgccctggatg
ctcggcgactggggcggcacacgctcggcgctggccgagcgcggctacgacttcaccctg
ggctacaccggggagatgggcagcaacctgcacggtggccacgaccacagcaacaccgcc
cgctacagcgaccagttcagcctgggcagccacctggacctgcagaagatcctcggctgg
cagggcgccgaattccagttgaccgtgaccgagcgccacggcaacaacatcagcaacgat
cgcatcaacgatccgcgggtgggcggcttcacctcggcccaggaagtctggggccgtggc
cagacctggcggctgacccagatgtggttcaagcagacgtacctggacggcgacctcgac
gtgaaggtcgggcgcttcggccagggcgaggacttcaacagcttcccctgcgacttccag
aacctggccttctgcggctcgcaggtgggcaactgggccggcagcatctggtacaactgg
ccggtgagccagtgggccctgcgcgtcaagtaccaccttacgccggaactctacgcccag
gtcggtgcctacgaacagaacccctccaacctcgagcgccagaacggcttcaagctcagc
ggcagcggcacccagggcgcagtactgccggtggaactggtgtggacgccggccatcgac
ggcctcaaaggggaatatcgcgccggttactactacagtagtcccaaggcacaagatgtt
tacaaggacggcaacggccaaccggcagccctcagtggccaggactatcgcagcagctcg
agcaagcacgggttctggctgggggcacagcagcaggtgacgtcgttggccagcgatcac
tcacgtggcctgagcgtttttgccaatgccacgctgcacgacaagaagaccaatgccatc
gacaactatgttcaggcaggtgtggtttacaaagggctgttcgatgcccgcgccaaggac
gacatcggcttcgccctcgctcgcgtgcacgtcaacccggcctatcgcaggaacgccgag
gcccgcaaccgcgccaatgccctcttcgactacgacaaccccgccttcctgcccgtccag
gacaccgagtacagcgccgagctgtattacggcatccacctggcccagtggctgaccgtg
cgcccgaacctgcagtacatccgccacccgggcggggtcgggcacgtggacgacgcgctg
atcggcggcctcaagatccagagcagcttctga
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