Pseudomonas sp. SD17-1: N0B28_20740
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Entry
N0B28_20740 CDS
T11807
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psdd Pseudomonas sp. SD17-1
Pathway
psdd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psdd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N0B28_20740 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psdd03400
]
N0B28_20740 (ung)
Enzymes [BR:
psdd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
N0B28_20740 (ung)
DNA repair and recombination proteins [BR:
psdd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
N0B28_20740 (ung)
Prokaryotic type
N0B28_20740 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
FragX_IP
Motif
Other DBs
NCBI-ProteinID:
WEJ20672
LinkDB
All DBs
Position
complement(4561499..4562191)
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AA seq
230 aa
AA seq
DB search
MTNDDRIKLEPSWKDALRGEFEQPYMQQLREFLRQEYAAGKEIYPPGPLIFNALNSTPLD
QVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELQRDLNIPIPNHGYLQSWA
EQGVLLLNTTMTVERSIAASHAKKGWESFTDRIIQLVSERQPATVFLLWGKHAQSKSVLI
DGTKHLVLKSVHPSPLSAYRGFIGCGHFSRANKFLEQHGLAPVEWALPAL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgatgaccgcatcaaactcgaaccgagctggaaagacgctctgcgcggcgaa
ttcgaacagccctacatgcagcaactgcgtgagttcctgcgtcaggaatatgcggccggc
aaggagatctatcccccggggccgctgatcttcaatgcgctcaactccacaccgctggac
caggtcaaagtggtgattctggggcaggacccctaccacggcccgggccaggcacacggc
ctgtgcttctcggtgcagcctggggtgcccgcgccgccgtcgctggtgaacatctacaag
gagttgcagcgcgacctgaacatcccgatcccgaaccacggctacctgcagagctgggcc
gaacagggcgtgctgctgctcaataccaccatgaccgtggagcgctcgattgccgcgtcg
catgccaaaaaaggctgggagtcgttcaccgaccgcatcatccagctggtcagtgagcgc
cagcccgccaccgtgttcctgttgtggggcaagcatgcccagagcaagtctgtgctgatc
gacggtaccaagcatctggtgctcaagtcggtgcatccttcaccgttgtcggcctaccgt
ggcttcatcggctgcgggcatttcagccgggccaacaagtttctggaacagcacgggctg
gcgccggtggagtgggcgctaccggcgttgtaa
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