Pseudomonas sp. SD17-1: N0B28_23290
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Entry
N0B28_23290 CDS
T11807
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
psdd Pseudomonas sp. SD17-1
Pathway
psdd00900
Terpenoid backbone biosynthesis
psdd01100
Metabolic pathways
psdd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
psdd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
N0B28_23290 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
psdd01006
]
N0B28_23290 (ispA)
Enzymes [BR:
psdd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
N0B28_23290 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
N0B28_23290 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
N0B28_23290 (ispA)
Prenyltransferases [BR:
psdd01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
N0B28_23290 (ispA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
WEJ21150
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All DBs
Position
5099385..5100272
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AA seq
295 aa
AA seq
DB search
MIAAYQARCQAQVDAALETLFHAPSSELERLYAAMRYSVMNGGKRVRPLLAYAACEALGG
ASSDADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLA
FSALLDPRLSPQSDAIRLAMVQAVAQGAGPAGMVGGQAIDLGSVGLKLDQTALEYMHRHK
TGALIETSVKVGALASARADAQTLAALQQYAQAIGLAFQVQDDILDVESDTATLGKRQGA
DIARDKPTYPALLGLEAAKAYALELRDQALAALAGFDDKAEPLRALARYIVERRS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgattgccgcctaccaggcccgttgccaggcccaggtggatgccgcgctggaaaccctg
ttccacgctccctcgagcgaactcgagcgcctgtatgccgccatgcgctacagcgtgatg
aacggcggcaagcgggtacgcccgctgctggcctatgccgcctgcgaggcgctgggtggc
gccagcagcgatgccgacggcgccgcctgcgcagtcgagctgatccacgcctattcgctg
gtgcatgacgacctgccggcaatggacgacgacgacctgcgtcgcggccagcccaccacc
cacaagaaattcgacgaggcctgcgcgatcctggccggcgacggcttgcagagcttggcc
ttcagcgccctgctcgacccgcgcctgagcccgcagagcgatgccattcgcctggccatg
gtgcaggccgtggcccagggcgccggccccgccggcatggtcggtggccaggccatcgac
ctgggctcggtggggctcaagctcgatcagaccgcgctggaatacatgcaccggcacaag
accggcgcgctgatcgaaaccagcgtcaaggtcggcgccctagccagcgcgcgggccgat
gcccagacgcttgcggccttgcagcagtatgcccaggccatcggcctggcgttccaggtg
caggacgacatcctggatgtcgagagcgataccgcgaccctgggcaagcgccagggcgca
gatatcgcccgcgacaagccgacctacccggcattgctggggctcgaagccgccaaggcc
tatgcgctggaactgcgcgaccaggcgctggcagcgctggctgggttcgatgacaaggcc
gagccgctgcgggcgttggcgcggtacatcgtcgaacgccgcagttga
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