KEGG   Pseudosulfitobacter sp. DSM 107133: DSM107133_01893
Entry
DSM107133_01893   CDS       T11885                                 
Symbol
rne_2
Name
(GenBank) Ribonuclease E
Organism
psdm  Pseudosulfitobacter sp. DSM 107133
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1 DnaJ_CXXCXGXG
Other DBs
NCBI-ProteinID: UOA27176
LinkDB
Position
1920251..1923178
AA seq 975 aa
MLIDATHAEETRVVVVDGNKVEEFDFESENKRQLAGNIYLAKVTRVEPSLQAAFVDYGGN
RHGFLAFTEIHPDYYQIPIADREALMEEERAYAEAQRAKDEDDDKPKRSSRSRSRSRSST
KAEDTNSDDAVTSSDDVGGMETIDLSDDADAVDEGSSPMETVRETPVETPAADEDQSHDD
DDDNAGDEDTAADAADKDDSIESVADEDDSEDIRPARKPRAKRYKIQEVIKVRQILLVQV
VKEERGNKGAALTTYLSLAGRYCVLMPNTARGGGISRKITNAVDRKKLKEIANEIEVPRG
AGLIVRTAGAKRTKAEIKRDYEYLQRMWEQIRELTLKSIAPAKIYEEGDLIKRSIRDLYN
RDIDEVFVEGERGYRIAKDFMKMIMPSHAKNVKRYEDSLPLFARYQVESYLAGMFNPTVQ
LPSGGYIVIGVTEALVAIDVNSGRATKEGSIEQTATKTNLEAAAEVARQLRLRDLAGLIV
IDFIDMDERKNNAAVEKMMKDKLKTDRARIQVGRISGFGLMEMSRQRLRPGMIEATTQPC
QACHGTGLIRSDDNLALSILRQIEEEGTRRRSREVLVKCPVGISNFLMNQKREHIAQIEA
RYGLSVRIEGDPALVSPDFNIEKFKTATRVVTAATQVVSVDTSIMDQIDEADARAAEAAE
AADIAAEAAQEAKAAQPAPQSHPAAEVGEDGEPKPKRRRRRRRRRSKSSTGEDQNGENGR
DDDDDQDETSDAASTPETKADAPEEGSATKAEESAEAKPKSTRSRSRSSAKKTETAADDS
AAEVPAVDAPAEDAEAAAKPKVTRTRSTRTTAAKSATTAKAKTTAKATTAKTTKAKAAET
EVTDAETPAPKPKRTRVSAKAKAEAAAAAEAAAQTEAPAGEATPEAPAVAEAPVAEAPAA
VAPVAESKPAVTPATDAPAVDVPVAEAQVEQPEAKAEEPAAAPEPTPAPAAEEPAPANED
TPAKPKRKGWWSLGG
NT seq 2928 nt   +upstreamnt  +downstreamnt
atgcttatcgatgccacccacgccgaggaaacgcgcgttgtggtggtcgacggaaacaaa
gttgaagagttcgattttgaatctgaaaacaaacgccagcttgctggcaacatctatctc
gccaaggtaacgcgggttgaaccgtcgcttcaggcggcgttcgtagattacggcggcaac
cgccacggtttccttgcgttcacggaaatccatcctgattactatcagatccccatcgcc
gaccgcgaggcgttgatggaggaagaacgcgcctatgccgaagcgcagcgcgccaaggat
gaagatgacgacaagcccaagcggtcttcgcgctcgcgttcgcgcagccggtcgtcaacc
aaggccgaagacaccaacagcgatgatgcggtgacatcttccgatgacgtcgggggcatg
gaaaccattgacctcagcgacgacgcagatgcagtggacgaaggctcgtcgccaatggaa
accgtgcgcgaaacgccggtggaaacacctgcggcggacgaagaccagtcgcatgatgat
gacgacgataatgcgggcgacgaagacactgctgccgatgccgccgacaaagacgacagc
atcgaatctgtcgccgacgaagacgacagcgaagacattcgccccgcgcgcaaaccccgc
gccaaacgctacaagattcaggaagtgatcaaggttcgccagatcctgctggttcaggtc
gtcaaggaagagcgcggcaacaagggtgcagcgttgaccacatacctgtcgctggccggt
cgctattgcgtcctgatgcccaacaccgcccgtggcggtggcatcagccgcaagatcacc
aacgccgttgaccgcaagaagctgaaagagatcgcgaacgagatcgaagtgccccgtggc
gccggtttgatcgtgcgcaccgccggtgccaaacgcaccaaggccgaaatcaaacgcgac
tatgaatacctgcaacgtatgtgggagcagatccgcgagctgacgctgaaatccattgcg
cccgcgaaaatctacgaagagggcgacctgatcaaacgctcgatccgcgatctgtacaac
cgcgacatcgacgaagtgtttgtcgagggcgagcgcggctatcgcatcgccaaggacttc
atgaaaatgatcatgccgtcccatgccaagaacgtgaaacgctacgaagacagcctgccg
ctgttcgcccgctatcaggtcgaaagctatctggcgggcatgttcaaccccacggttcaa
ctgccttcgggtggctatatcgtgatcggtgtgaccgaagcgctggtggcgattgacgtc
aactcgggccgtgccaccaaggaaggctcgatcgagcagaccgcgaccaagaccaacctt
gaggccgccgccgaagtggcgcgccagttgcgtctgcgcgaccttgcggggctgattgtc
atcgactttatcgacatggacgagcgcaagaacaatgccgccgtcgaaaagatgatgaag
gacaagctgaagaccgaccgcgcgcgcattcaggtgggccgcatttcgggctttggcctg
atggaaatgtcgcgccagcgtctgcgccccggcatgatcgaggcgacaacgcagccgtgt
caggcctgccacggcaccggtctgatccggtcggacgacaaccttgcgctgtcgatcctg
cgccagatcgaggaagagggcacccgccgccggtcgcgcgaagtgctggtgaaatgccct
gtcggcatctcgaacttcctgatgaaccagaaacgcgaacatatcgcacagatcgaagcg
cgctatgggctgtcggtgcgtatcgagggtgatccggcgttggtcagccctgatttcaac
atcgaaaagttcaagaccgccacgcgcgttgtgactgccgccacgcaggtggtttcggtc
gacacatccatcatggaccagatcgacgaggcggacgcccgcgcagccgaagctgccgaa
gcggcagacatcgcagccgaagcggcacaagaggccaaggcagcgcagcctgcgccccag
tcgcatcccgccgcagaagtgggtgaagacggcgagcccaaacccaagcgtcgtcgtcgg
cgtcgtcggcgcaggagcaagtcgtcgacaggcgaggaccagaacggtgagaacggtcgt
gatgatgatgacgatcaggacgagacgtccgacgccgcatcgacgcccgagaccaaggca
gatgctccagaggaaggttctgcgacaaaggccgaggagagtgccgaggccaagccgaaa
tcgacacgcagccggtcgcgttcttccgcgaagaagaccgagacagctgctgacgatagt
gcagccgaagtccccgcagttgatgcacccgcagaggacgccgaggcagcggccaagccc
aaggtgacgcgcacacggtcgacccgcacgaccgctgccaaatctgcaaccaccgccaag
gccaagacgacagccaaggcgacaactgcaaagaccaccaaggcgaaagcggccgaaacc
gaagtcaccgacgctgaaacgcccgcgccaaagcccaagcgcacgcgggtttcggccaag
gccaaggcagaagccgctgccgccgcagaggcagcagcccagaccgaagcgcccgcaggc
gaggcgacgcccgaagcgcccgcagtcgctgaggcgcccgttgccgaagctccggcggct
gtggctccggttgctgagagcaagccggcagtgactccagcgaccgatgccccggcagtt
gatgttccggtcgccgaagcgcaggttgaacagccagaggccaaggcagaagaacccgcg
gcggcacctgaacccacgcctgcacccgcagccgaggaacctgcacctgcgaacgaagac
acccccgccaagcccaagcgcaagggctggtggtctttgggtggctag

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