Pseudosulfitobacter sp. DSM 107133: DSM107133_03036
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Entry
DSM107133_03036 CDS
T11885
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psdm Pseudosulfitobacter sp. DSM 107133
Pathway
psdm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psdm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DSM107133_03036 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psdm03021
]
DSM107133_03036 (rpoA)
03400 DNA repair and recombination proteins [BR:
psdm03400
]
DSM107133_03036 (rpoA)
Enzymes [BR:
psdm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DSM107133_03036 (rpoA)
Transcription machinery [BR:
psdm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DSM107133_03036 (rpoA)
DNA repair and recombination proteins [BR:
psdm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DSM107133_03036 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
UOA28290
LinkDB
All DBs
Position
complement(3041771..3042787)
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPQQLDVKPGNDPARQATVVAEPLERGFGLTMGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIILNLKGVSLSMEVEGPKRLSISAKGPGVVTAGDISE
SAGIAILNREHVICHLDDGADLYMELTVNTGKGYVAADKNKPEDAPIGLIPIDAIYSPVK
RVSYDVQPTREGQVLDYDKLTMKIETDGSLTPDDAVAFAARILQDQLGIFVNFDEPESAS
RQDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDSF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaattgggctgaactgatcaagcctcagcagcttgacgtgaaaccgggc
aacgacccggcgcgtcaggccacagttgtcgccgaaccgctggaacgcggctttggtctg
acaatgggcaacgccctgcgccgcgtgctgatgagctcgctgcaaggtgcggccatcaca
tcggtgcaaatcgacaacgtgctgcacgagttttcctcggtggccggtgtgcgcgaagac
gtgaccgacatcatcctgaacctcaagggcgtgagcctgagcatggaagtcgaagggccc
aagcgcctgtcgatttcggcaaaaggtccgggcgttgtcactgccggcgacatctcggaa
agcgcgggcattgcgattctgaaccgcgaacatgtgatctgccacctggatgacggtgcc
gatctgtacatggaactgaccgtaaacacgggcaagggctatgtcgcagccgacaagaac
aaacccgaagacgcgcccatcggtctgatcccgatcgacgcgatctattcgcctgtcaaa
cgcgtcagctatgacgtgcagccgacgcgcgaaggtcaggttctggactatgacaagctg
accatgaagatcgaaacagacggctcgctgacgccggacgacgccgtggcctttgccgcg
cgtatcctgcaagaccagctgggcatcttcgtcaacttcgacgagccggaatcggcttcg
cgtcaggacgacgacgacggtctcgagttcaacccgcttctgctgaagaaagtggacgag
ctggaactgtcggtacgttcggccaactgcctgaagaacgacaacatcgtctacatcggc
gacctgatccagaaaaccgaagcagaaatgctgcgcaccccgaactttggccgcaagtcc
ttgaacgaaatcaaggaagtgctgtcgggcatgggtctgcaccttggcatggacgtcgag
gactggccaccagacaacatcgaggatctggcgaagaaattcgaagattccttctaa
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