Pseudonocardia sp. DSM 110487: K1T35_01915
Help
Entry
K1T35_01915 CDS
T10356
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psds Pseudonocardia sp. DSM 110487
Brite
KEGG Orthology (KO) [BR:
psds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psds03032
]
K1T35_01915 (topA)
03400 DNA repair and recombination proteins [BR:
psds03400
]
K1T35_01915 (topA)
Enzymes [BR:
psds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K1T35_01915 (topA)
DNA replication proteins [BR:
psds03032
]
Prokaryotic type
DNA Topoisomerases
K1T35_01915 (topA)
DNA repair and recombination proteins [BR:
psds03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K1T35_01915 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QYN39966
LinkDB
All DBs
Position
complement(454365..457085)
Genome browser
AA seq
906 aa
AA seq
DB search
MRRLVIVESGTKAKKIQQYLGRDYVVEASVGHIRDLPRGAADVPAKYKGESWARLGVDVD
NQFAPLYIVTPEKKGKVAELKDALKSVDEILLATDPDREGEAIAWHLLDTLKPKIPVRRM
VFHEISESAIRAAVENLRDLDHDLVDAQETRRILDRLYGYEVSPVLWKKVMPKLSAGRVQ
SVATRIVVQRERERMAFIPASYWDIAALMDAGAEASPRQFPARLVAVDGTRVATGRDFGA
DGQLKSAGRKDAARALDEASARRLAEALQDRDLVVDSVESKPYTRKPYPPFMTSTLQQEA
GRKLRFSADRTMRSAQRLYENGYITYLRTDSTTLSDTAIQAARTQARDLYGAEYVSPQPR
QYTRKVKNAQEAHEAIRPAGDTFRTPGEIAREVDGDDFRLYELIWQRTVASQMADARGTT
VSIRIAGTAATGEDVTFAASGRTITFPGFLKAYVETLDEGSDGQADDAESRLPELVKGQP
LTAAELNPEGHTTNPPARYTEPSLIKALEDLGIGRPSTYSSIIKTIQDRGYVWKKGQALV
PSWIAFAVIGLLELHFGRLVDYGFTAAMEDELDAIAQGTQHRTDWLTGFYFGAEQGSEGS
VARSGGLKKLVGVNLEEIDAREINSVPVFDDVVVRVGRYGPYLERVRDGESQRANLPDDL
PPDELTPEVAEQLFSVPQEGRSLGVDPVTGHEIVAKEGRYGPYVTEILPETEAPAESNGN
GTKKKAAAKPKPRTGSLFKSMTTESVTLEDALKLLSLPRLVGTDPESGEEITAQNGRYGP
YLKKGTDSRSLSGEDQLFTVTLDEALELYKQPKQRGRRAAAATPPLRELGKDTATGNPMV
IKDGRFGPYVTDGETNASLRKGDDVEKITDERASELLAERRTKAGTTKKAPARRKAAPRK
KAEAKS
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcgacggttggtgatcgtcgagtccggcacgaaggccaagaagatccagcagtacctc
ggccgcgactacgtcgtggaggcctcggtcgggcacatccgcgacctgccgcgcggggcg
gccgacgtgccggccaagtacaagggcgagtcgtgggcgcggctgggtgtcgacgtcgac
aaccagttcgcgccgctgtacatcgtcacgcccgagaagaagggcaaggtcgccgagctc
aaggacgcgctgaagtccgtcgacgagatcctgctcgccaccgaccccgaccgcgagggc
gaggccatcgcctggcacttgctcgacacgctcaagccgaagatcccggtacgccggatg
gtcttccacgagatcagcgagtcggcgatccgcgctgccgtggagaacctgcgcgacctc
gaccacgacctcgtcgacgcgcaggaaacccgccgcatcctcgaccgcctctacggctac
gaggtctcccccgtgctgtggaagaaggtcatgccgaagctctcggccggccgggtgcag
tcggtggccacgcggatcgtcgtgcagcgcgagcgcgagcggatggcgttcatcccggcg
tcctactgggacatcgccgccctgatggatgcgggcgccgaggcatcgccgcggcagttc
ccggcacggctggtcgccgtcgacggcacccgtgtcgccaccggtcgcgacttcggcgcc
gatgggcagctcaagagcgccgggcggaaggacgccgcaagggccttggacgaggcgagc
gctcgccggctggcagaggcgctccaggatcgcgacctcgtcgtcgattccgtcgagtcg
aagccctacacccgcaagccgtacccgccgttcatgacgtccacgctgcagcaggaggcc
ggacgcaagctgcggttctcggccgaccgcaccatgcgcagcgcgcagcggctctacgag
aacggctacatcacctacctgcgcaccgactcgaccacgctgtcggacacggccatccag
gccgcccgcacccaggcgcgcgacctgtacggcgccgagtacgtctcgccgcagccgcgg
cagtacacgcgcaaggtcaagaacgcgcaggaggcacacgaggcgatccggccggcgggc
gacaccttccgcacgcccggcgagatcgcccgcgaggtcgacggcgacgacttccggctc
tacgagctcatctggcagcgcacggtggcctcccagatggccgatgcacgcggcaccacc
gtcagcatccggatcgccggcacggccgccaccggtgaggacgtgacgttcgccgcctcc
ggccgcacgatcacgttccccggcttcctcaaggcctacgtcgagacgctcgacgagggc
agcgacggacaggccgacgacgccgagtcgcggctgcccgagctggtgaagggccagccg
ctcacggcggccgagctgaatcccgagggccacaccaccaatccgcccgcccgctacacc
gagccgagcctgatcaaggcgctcgaggacctcggcatcgggcggccgtccacgtactcg
tcgatcatcaagaccatccaggaccgcggctacgtgtggaagaaggggcaggccctcgtg
ccgtcctggatcgcgttcgccgtgatcggactgctcgagctccacttcgggcggctggtc
gactacggcttcacggcggcgatggaggacgagctcgacgcgatcgcgcagggcacccag
caccgcaccgactggctgacgggcttctacttcggcgccgaacagggcagtgaaggctcg
gtggcgcggtccgggggcctgaagaagctcgtgggcgtcaacctcgaggagatcgacgcc
cgggagatcaactccgtgccggtgttcgacgacgtcgtcgtgcgcgtcggccgctacggg
ccctacctggagcgggtgcgcgacggggagtcgcagcgggccaacctgcccgacgacctg
ccgcccgacgagctcacgcccgaggtggccgagcagctgttctcggtgccgcaggaaggc
cgctcgctgggcgtcgatccggtcaccgggcacgagatcgtggcaaaggagggccgctac
gggccctacgtcaccgagatcctcccggagaccgaggcgcccgcggagagcaacggcaac
ggcaccaagaagaaggccgccgcgaagcccaagccccgcaccggttcgctgttcaagtcg
atgaccaccgagtcggtcacgctcgaggacgcgctgaagttgctctcgctgccccggctg
gtgggcaccgacccggagagcggcgaggagatcaccgcccagaacggccgctacgggcca
tatctgaagaagggcaccgactcgcgctcgctctcgggcgaggaccagctgttcacggtc
acgctcgacgaggcgctggagctgtacaagcagcccaagcagcggggccgacgcgccgct
gcggccaccccgccgctgcgcgagctcggcaaggacaccgccaccggcaacccgatggtg
atcaaggacggtcggttcggcccgtacgtcaccgacggcgagaccaacgcgtccctgcgc
aagggcgacgacgtcgagaagatcaccgacgagcgggcgagcgagctgctggccgagcgc
cgcaccaaggcgggcacgacgaagaaggcgcccgcccgcaggaaggccgcaccgcgcaag
aaggccgaggccaagagctga
DBGET
integrated database retrieval system
