Pseudonocardia sp. DSM 110487: K1T35_05990
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Entry
K1T35_05990 CDS
T10356
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
psds Pseudonocardia sp. DSM 110487
Pathway
psds03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K1T35_05990 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psds03400
]
K1T35_05990 (xth)
Enzymes [BR:
psds01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
K1T35_05990 (xth)
DNA repair and recombination proteins [BR:
psds03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
K1T35_05990 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
TetR_C_6
Motif
Other DBs
NCBI-ProteinID:
QYN36829
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All DBs
Position
1261710..1262564
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AA seq
284 aa
AA seq
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MRLATWNVNSALIRLPRLLPWLDERAPDVVCLQETKLSDEAFAEAFDDPLAERGYAVAHF
GEGRWNGVALLSRVGLDDVVHGLPGEPRFPAPDSPAEARAITATCGGLRVTSVYVPNGRT
PDDPHYAYKLDWLAALRESITDPAAAVVAGDMNIAPTDDDLWDPALFVNSTHVTPAERKA
LAEIKGLGLHDVVRDRWPTERVFTYWDYRAGRFHQDLGMRIDLVLAGADAAARVQAAWVD
RKARKGSGPSDHAPVIVDLDTAPDGDAGPVVPPPSTPKKLPHRS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctggctacgtggaacgtgaactcggccctcatccgcctgccccggctgctgccg
tggctggacgagcgcgcgcccgatgtcgtgtgcctgcaggagaccaagctgtccgacgag
gcgttcgcggaggcgttcgacgatccactggccgagcgcggctacgccgtcgcccatttc
ggcgagggccgctggaacggggtggcgctgctgtcgcgcgtcgggctcgacgacgtggtg
cacgggctgccaggggagccgcggttcccggcccccgactcgcccgccgaggcgcgggcg
atcacggcgacgtgtggcgggttgcgcgttacgtccgtctacgtgcccaacggccgcacc
cccgacgacccgcactacgcgtacaagctggactggctcgccgcgctgcgggagtcgatc
accgacccggccgcggccgtggtcgcgggcgacatgaacatcgcccccaccgacgacgac
ctgtgggacccggcgctcttcgtgaactcgacccacgtcacgcctgccgagcgcaaggcg
ctggccgagatcaagggcctcgggctgcacgacgtggtgcgcgaccggtggccgaccgaa
cgggtcttcacgtactgggactaccgggccgggcggttccaccaggacctcggcatgcgc
atcgatctcgtgctcgcgggagccgacgccgccgcgcgcgtgcaggccgcgtgggtggac
cgcaaggcccgcaagggcagcggtccgagcgaccacgccccggtgatcgtcgacctcgac
acggcacccgacggcgacgcgggcccggtggtgccgccgccgtcgaccccgaagaagctg
ccgcaccgttcctga
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