Pseudonocardia sp. DSM 110487: K1T35_10485
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Entry
K1T35_10485 CDS
T10356
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psds Pseudonocardia sp. DSM 110487
Pathway
psds03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psds00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1T35_10485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psds03019
]
K1T35_10485
03400 DNA repair and recombination proteins [BR:
psds03400
]
K1T35_10485
Enzymes [BR:
psds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K1T35_10485
Messenger RNA biogenesis [BR:
psds03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K1T35_10485
DNA repair and recombination proteins [BR:
psds03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K1T35_10485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
QYN37624
LinkDB
All DBs
Position
complement(2295923..2298010)
Genome browser
AA seq
695 aa
AA seq
DB search
MTSTVSSDLRDRAESVLATLAGPGARLREDQWTAIHALVAERRRALVVQRTGWGKSAVYF
VATALLRAEGAGPTVIVSPLLALMRNQIDAAARAGIRAATVNSANTGDWERTYAAVADGE
VDVLLVSPERLNNPDFRDRVLPRLTAGAGMLVVDEAHCVSDWGHDFRPDYRRLRALIAEL
PAGIPVLATTATANDRVVVDVTEQLGLASGEPLVLRGSLDRESLRLSVVPLATPAQRLGW
LADHIDALPGAGIVYTLTIAAAEEVADFLRERGHPVASYTGKTDPGERLAAEGDLLDNRV
KALVATSALGMGFDKPDLGFVVHLGAPASPVAYYQQIGRAGRAVERAEVVLLPGREDRDI
WAYFASLAFPPEPLVRQTLAVLGDAPLSTAAVETRVDLSRTRLEMLLKVLDSDGAVRRVK
GGWVATGEEWVYDRDRHQRIAEARRAEQKAMLEYIDTTGCRMQFLRRQLDDPAAERCGRC
DTCTTPAWSTDVDEGAAAAAQDRISRPGVEVAPRKQWPSGMAELGVAASGRIPAGELAAP
GRVIGRLSDIGWGTRLRELVGGDDAPVPGDVLDACVRVLAGWGWAERPVGVVGIGSRTRP
HQLDHLARRISEIGRLPLIGTLAPAGPRPEEHANSPQRLAAVWSAFEPPAFPVPDGPVLL
VDDVIDSGWTATVAARLLRRAGASAVLPFALAQRG
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccgtgtcctcggatctccgtgaccgcgccgagtccgtgctcgccacgctc
gcgggcccgggcgcccggctccgcgaggaccagtggacggccatccacgcactcgtggcc
gagcgcaggcgggcgctcgtggtgcagcgcaccgggtggggcaagtcggcggtctacttc
gtggccaccgcgctgctgcgggccgaaggcgccgggcccacggtgatcgtctcgccattg
ctcgcgctcatgcgcaaccagatcgacgccgccgcgagggccggcatccgcgccgccacg
gtcaactcggccaacaccggcgattgggagcgcacctacgccgcggtcgcggacggcgag
gtcgacgtgctgctggtgagccccgagcggctcaacaaccccgacttccgcgaccgggtg
ctgccgcggctcacggcgggcgccggcatgctcgtcgtcgacgaggcccactgcgtgtcc
gactggggccacgacttccggcccgactaccggcgcctgcgcgcgctcatcgccgagctc
cccgccggtatccccgtgctcgccaccacggccaccgcgaacgaccgcgtggtcgtcgac
gtcacggagcagctcgggctcgcatcaggggaaccgctggtcctgcgcggctcgctcgac
cgggagagcctgcgcctctcggtcgtcccgctcgccacgcccgcgcaacggctcggctgg
ctcgccgaccacatcgacgcgttgccgggcgcgggcatcgtctacacgctcacgatcgcg
gccgcggaggaagtggcggacttcctgcgcgagcgcggccaccccgtcgcctcctacacc
ggcaagaccgaccccggggagcggctcgccgccgagggcgacctgctcgacaaccgcgtc
aaggcgctcgtggccaccagcgcgctcgggatggggttcgacaagcccgatctcgggttc
gtcgtgcacctcggggcgcccgcgtcgccggtggcgtactaccagcagatcggccgtgcg
ggccgcgccgtcgagcgggccgaggtcgtgctgttgcccggccgggaggaccgcgacatc
tgggcctatttcgcctcgctcgcgttcccgccggagccgctcgtgcgccagaccctggcc
gtgctgggtgacgcgccgctgtccaccgcggccgtcgagacccgcgtcgacctgtcccgc
acccgcctggagatgctgctcaaggtgctcgacagcgacggcgccgtgcgccgcgtcaag
ggcgggtgggtggccaccggcgaggagtgggtctacgaccgggatcgccaccagcgcatc
gcggaggcgcgccgcgccgagcagaaggcgatgctcgagtacatcgacaccaccggctgc
cggatgcagttcctgcgcaggcagctcgacgacccggccgccgagcggtgcggccgctgc
gacacctgcaccaccccggcatggagcaccgacgtcgacgagggcgcggccgcggcggcc
caagatcggatcagccggccgggcgtcgaggtcgcgccgcgcaaacagtggccgagcggc
atggcggagctgggcgtcgcggcgtcgggccggatcccggcgggcgagctcgccgcgccg
ggccgggtgatcgggcgcctgtccgacatcgggtggggcacccggctgcgcgagctggtc
ggaggcgatgacgcgcccgtccccggcgacgtgctcgacgcgtgcgtgcgcgtgctcgcc
ggatggggctgggcggaacgaccggtgggcgtggtcggcatcggctcccgcacccgtccc
caccagctcgaccacctggcccggcggatctccgagatcggccgccttcccctcatcggc
accctcgccccggccgggcctcgccccgaggagcacgccaacagcccgcagcggctcgcg
gcggtgtggtccgcgttcgaaccgcccgcgttcccggtgccggacgggccggtcctgctg
gtggacgacgtgatcgacagcggctggacggccactgtcgccgcccgcctgctgcgacgc
gccggtgcatcggcggtgctgccgttcgcgctggcccagcgcggctga
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