Pseudonocardia sp. DSM 110487: K1T35_11050
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Entry
K1T35_11050 CDS
T10356
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psds Pseudonocardia sp. DSM 110487
Pathway
psds03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psds00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1T35_11050 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psds03019
]
K1T35_11050 (groL)
03110 Chaperones and folding catalysts [BR:
psds03110
]
K1T35_11050 (groL)
03029 Mitochondrial biogenesis [BR:
psds03029
]
K1T35_11050 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psds04147
]
K1T35_11050 (groL)
Enzymes [BR:
psds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
K1T35_11050 (groL)
Messenger RNA biogenesis [BR:
psds03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
K1T35_11050 (groL)
Chaperones and folding catalysts [BR:
psds03110
]
Heat shock proteins
HSP60 / Chaperonin
K1T35_11050 (groL)
Mitochondrial biogenesis [BR:
psds03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
K1T35_11050 (groL)
Exosome [BR:
psds04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
K1T35_11050 (groL)
Exosomal proteins of other body fluids (saliva and urine)
K1T35_11050 (groL)
Exosomal proteins of breast cancer cells
K1T35_11050 (groL)
Exosomal proteins of colorectal cancer cells
K1T35_11050 (groL)
Exosomal proteins of bladder cancer cells
K1T35_11050 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QYN37722
LinkDB
All DBs
Position
2415054..2416742
Genome browser
AA seq
562 aa
AA seq
DB search
MAKELRFGEEGRRLLQAGVDQLAEAVKSTLGPKGRNVILEKITGSPEVTNDGVTIAREIH
LRDPFENMGAQLVKEAAVKTNDTVGDGTTTAIVLAQAIVRQGMTAIAAGGNPVLVKRGID
IGVRRIVEHLQRVTHPVSTEQDYARVASISANDDEEIGRIVGRALHTVGEDGVVTVEDVP
QHGVSVGFVEDFAFDNGYVTPYMVTDPGRLEAIVDDPYLLFTAEKVKDVQSLMPVLDKIM
RGERRPLVLVAETVEGTALQMLVHNHVNRTFQAVAIRAPGFGEKRIHLLEDMAALCGGKV
HSRSSAFALEQMTTEHLGRASQVRVTSDSTTIIGGGGDRAALELRLTQLRAELARATFGS
DEDFLSERIARLSGKAAVIGVGAPTNAEAKEIRHRVDDSLQATRAAIAEGIVAGGGVALL
HAEPALDDLDVGGDYRIGVEIVRAALTEPVHLIASNAGYDGDDVVKQVTALGVDEGFDAL
EGRFGDLVELGVIDPLRVVRSALQNGASVAGLILTTNSLVAEEVTPWNKSLMTEFGPLDE
GIPQPSPDSSTPQSLGLGPSIG
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggaactgcgattcggagaggagggccggcggttgctccaggccggcgtcgac
cagttggccgaggccgtcaagagcacgctcgggcccaagggccgcaacgtcatcctggag
aagatcacggggtcgcccgaggtcacgaacgacggcgtgacgatcgcgcgggagatccac
ctgcgcgacccgttcgagaacatgggcgcgcagctggtgaaggaagcggcggtcaagacg
aacgacaccgtcggcgacggcaccaccacggcgatcgtgctcgcccaggcgatcgtccgg
cagggcatgacggcgatcgcggcgggcggcaacccggtgctcgtcaagcgcggcatcgac
atcggagtgcggcgcatcgtcgagcacctgcagcgggtgacccacccggtctccaccgag
caggactacgcccgggtggcgtcgatctccgcgaacgacgacgaggagatcggccggatc
gtcgggcgggcattgcacaccgtcggcgaggacggcgtcgtcaccgtggaggacgtcccg
cagcacggcgtgagcgtcgggttcgtcgaggacttcgcgttcgacaacggctacgtgacg
ccgtacatggtcaccgaccccggccggctcgaggcgatcgtcgacgacccgtacctgctg
ttcacggcggagaaggtcaaggacgtccagtccctcatgccggtgctcgacaagatcatg
cgtggtgagcggcgcccgctcgtgctcgtcgccgagaccgtcgagggcacggcgctgcag
atgctcgtgcacaaccacgtgaaccgcacgttccaggcggtggcgatcagggcgcccggc
ttcggcgagaagcgcatccacctgctcgaggacatggcggcgctctgcggcggcaaggtg
cacagcaggagttccgcgttcgccctcgaacagatgaccaccgagcacctcgggcgggcc
tcgcaggtgcgagtcaccagcgacagcaccacgatcatcggcggcggcggggaccgggcg
gccctcgaactacggctcacgcagttgcgggccgagctggcccgcgcgacgttcggcagc
gacgaggacttcctgtccgagcgcatcgcgcggctgtcgggcaaggccgcggtgatcggc
gtgggcgcgcccaccaacgccgaggccaaggagatccgccaccgcgtcgacgactccctg
caggccacgcgcgcggccatcgccgagggcatcgtcgcgggcggcggcgtcgcgctgctg
catgccgagcccgcgctcgacgacctggacgtcggcggtgactaccggatcggcgtcgag
atcgtgcgcgcagccctgaccgagccggtgcacctcatcgcctccaacgccggctacgac
ggcgacgacgtcgtcaagcaagtcaccgcactgggtgttgacgaagggttcgacgcgttg
gaaggtcgcttcggcgacctggtcgagttgggtgtgatcgacccgctgcgggtggtgcgt
tccgcgctgcagaacggcgcgtccgtggccggcctgatcctcaccaccaactcgctggtg
gccgaggaggtgaccccgtggaacaagtcgctgatgaccgagttcgggccgctcgacgag
gggatcccgcagccatcgccggactcgagcaccccgcagtcccttggcctcggcccgtcg
atcggttga
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